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  5. GRMZM2G060394

GRMZM2G060394


Description : SKP1-like 4


Gene families : OG_42_0000356 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G060394
Cluster HCCA clusters: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
At3g25650 No alias SKP1-like protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEL7] 0.04 Orthogroups_2024-Update
Bradi3g43760 No alias SKP1-like 4 0.02 Orthogroups_2024-Update
Glyma.14G222100 No alias S phase kinase-associated protein 1 0.04 Orthogroups_2024-Update
Kfl00055_0100 kfl00055_0100_v1.1 (at5g42190 : 233.0) Similar to SKP1 in yeast and humans... 0.02 Orthogroups_2024-Update
MA_10316948g0010 No alias (at5g42190 : 161.0) Similar to SKP1 in yeast and humans... 0.03 Orthogroups_2024-Update
PSME_00029950-RA No alias (at5g42190 : 192.0) Similar to SKP1 in yeast and humans... 0.02 Orthogroups_2024-Update
Potri.005G109900 No alias E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein 0.02 Orthogroups_2024-Update
Seita.1G001400.1 No alias ASK-type linker component of SCF E3 ubiquitin ligase complexes 0.03 Orthogroups_2024-Update
Sobic.010G218900.2 No alias ASK-type linker component of SCF E3 ubiquitin ligase complexes 0.02 Orthogroups_2024-Update
Solyc10g055610 No alias SKP1-like protein (AHRD V3.3 *** O82463_NICCL) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR016072 Skp1_comp_dimer 113 160
IPR016073 Skp1_comp_POZ 5 64
No external refs found!