GRMZM2G068471

Description : pescadillo-related

Gene families : OG_42_0005471 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005471_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G068471
Cluster	HCCA clusters: Cluster_4

Target	Alias	Description	ECC score	Gene Family Method
At5g14520	No alias	Pescadillo homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9LYK7]	0.03	Orthogroups_2024-Update
Bradi1g11730	No alias	pescadillo-related	0.03	Orthogroups_2024-Update
Cre16.g683793	No alias	pescadillo-related	0.02	Orthogroups_2024-Update
Mp4g12860.1	No alias	component PES of ribosome PES-BOP1-WDR12 (PeBoW) complex	0.02	Orthogroups_2024-Update
evm.model.contig_2150.6	No alias	(at5g14520 : 301.0) pescadillo-related; FUNCTIONS IN:...	0.01	Orthogroups_2024-Update
evm.model.tig00020961.62	No alias	(at5g14520 : 240.0) pescadillo-related; FUNCTIONS IN:...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005730	nucleolus	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0022613	ribonucleoprotein complex biogenesis	None	Extended
BP	GO:0042254	ribosome biogenesis	IEA	InterProScan predictions
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044428	nuclear part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004150	dihydroneopterin aldolase activity	IEP	Predicted GO
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Predicted GO
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Predicted GO
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	Predicted GO
BP	GO:0009119	ribonucleoside metabolic process	IEP	Predicted GO
BP	GO:0015969	guanosine tetraphosphate metabolic process	IEP	Predicted GO
MF	GO:0016832	aldehyde-lyase activity	IEP	Predicted GO
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Predicted GO
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
BP	GO:0042278	purine nucleoside metabolic process	IEP	Predicted GO
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0043038	amino acid activation	IEP	Predicted GO
BP	GO:0043039	tRNA aminoacylation	IEP	Predicted GO
BP	GO:0046128	purine ribonucleoside metabolic process	IEP	Predicted GO
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Predicted GO
BP	GO:1901068	guanosine-containing compound metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR010613	PES	10	264
IPR001357	BRCT_dom	354	441

External Links

No external refs found!