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  5. GRMZM2G072121

GRMZM2G072121


Description : expansin A13


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G072121
Cluster HCCA clusters: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Glyma.14G221500 No alias expansin 11 0.02 Orthogroups_2024-Update
MA_86877g0010 No alias (at1g69530 : 387.0) Member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
Mp3g03970.1 No alias alpha-class expansin 0.01 Orthogroups_2024-Update
Mp5g01930.1 No alias alpha-class expansin 0.01 Orthogroups_2024-Update
Potri.017G140000 No alias expansin A13 0.03 Orthogroups_2024-Update
Pp1s246_53V6 No alias alpha-expansin 1 0.02 Orthogroups_2024-Update
Pp1s325_11V6 No alias expa6 gene for putative alpha expansin protein family EXPA6 0.03 Orthogroups_2024-Update
Sopen02g025850 No alias Pollen allergen 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003713 transcription coactivator activity IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004529 exodeoxyribonuclease activity IEP Predicted GO
MF GO:0004536 deoxyribonuclease activity IEP Predicted GO
BP GO:0006448 regulation of translational elongation IEP Predicted GO
BP GO:0006449 regulation of translational termination IEP Predicted GO
BP GO:0006452 translational frameshifting IEP Predicted GO
MF GO:0008297 single-stranded DNA exodeoxyribonuclease activity IEP Predicted GO
MF GO:0008409 5'-3' exonuclease activity IEP Predicted GO
BP GO:0009891 positive regulation of biosynthetic process IEP Predicted GO
BP GO:0009893 positive regulation of metabolic process IEP Predicted GO
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010628 positive regulation of gene expression IEP Predicted GO
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
BP GO:0031325 positive regulation of cellular metabolic process IEP Predicted GO
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Predicted GO
MF GO:0035312 5'-3' exodeoxyribonuclease activity IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
BP GO:0043243 positive regulation of protein complex disassembly IEP Predicted GO
BP GO:0043244 regulation of protein complex disassembly IEP Predicted GO
MF GO:0045145 single-stranded DNA 5'-3' exodeoxyribonuclease activity IEP Predicted GO
BP GO:0045727 positive regulation of translation IEP Predicted GO
BP GO:0045901 positive regulation of translational elongation IEP Predicted GO
BP GO:0045905 positive regulation of translational termination IEP Predicted GO
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051247 positive regulation of protein metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 167 244
IPR009009 RlpA-like_DPBB 71 156
No external refs found!