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  5. GRMZM2G077202

GRMZM2G077202


Description : chloroplast beta-amylase


Gene families : OG_42_0000277 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000277_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G077202
Cluster HCCA clusters: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
A4A49_35845 No alias beta-amylase 1, chloroplastic 0.03 Orthogroups_2024-Update
At2g45880 No alias Beta-amylase 7 [Source:UniProtKB/Swiss-Prot;Acc:O80831] 0.02 Orthogroups_2024-Update
Brara.A01833.1 No alias beta amylase & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Brara.E00486.1 No alias EC_3.2 glycosylase & BZR-type transcription factor 0.02 Orthogroups_2024-Update
Brara.G00610.1 No alias EC_3.2 glycosylase & beta amylase 0.03 Orthogroups_2024-Update
Glyma.05G068000 No alias chloroplast beta-amylase 0.03 Orthogroups_2024-Update
Glyma.09G168300 No alias beta-amylase 1 0.04 Orthogroups_2024-Update
Glyma.12G197100 No alias beta-amylase 6 0.04 Orthogroups_2024-Update
Glyma.13G215000 No alias beta-amylase 3 0.04 Orthogroups_2024-Update
HORVU1Hr1G038920.3 No alias beta amylase & EC_3.2 glycosylase 0.05 Orthogroups_2024-Update
HORVU1Hr1G055140.1 No alias beta amylase & EC_3.2 glycosylase 0.06 Orthogroups_2024-Update
HORVU2Hr1G043920.3 No alias EC_3.2 glycosylase & beta amylase 0.03 Orthogroups_2024-Update
HORVU4Hr1G000520.1 No alias beta amylase & EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Kfl00034_0040 kfl00034_0040_v1.1 (at3g23920 : 514.0) Encodes a chloroplast beta-amylase.... 0.02 Orthogroups_2024-Update
Mp4g04500.1 No alias beta amylase 0.02 Orthogroups_2024-Update
PSME_00016872-RA No alias (at4g00490 : 580.0) Encodes a chloroplast beta-amylase.... 0.02 Orthogroups_2024-Update
PSME_00017705-RA No alias (at4g17090 : 655.0) Encodes a beta-amylase targeted to... 0.04 Orthogroups_2024-Update
PSME_00031599-RA No alias (at5g18670 : 428.0) putative beta-amylase BMY3 (BMY3);... 0.03 Orthogroups_2024-Update
Pp1s16_320V6 No alias bam2 (beta-amylase 2) beta-amylase 0.03 Orthogroups_2024-Update
Pp1s233_4V6 No alias F14O13.12; beta-amylase, putative / 1,4-alpha-D-glucan... 0.02 Orthogroups_2024-Update
Seita.2G134700.1 No alias beta amylase & EC_3.2 glycosylase & BZR-type transcription factor 0.02 Orthogroups_2024-Update
Seita.2G342700.1 No alias EC_3.2 glycosylase & beta amylase 0.06 Orthogroups_2024-Update
Seita.9G544600.1 No alias beta amylase & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Sobic.002G329400.1 No alias EC_3.2 glycosylase & beta amylase 0.05 Orthogroups_2024-Update
Sobic.004G027800.2 No alias EC_3.2 glycosylase & BZR-type transcription factor 0.03 Orthogroups_2024-Update
Solyc01g067660 No alias 1,4-alpha-glucan-maltohydrolase 0.04 Orthogroups_2024-Update
Solyc09g091030 No alias Beta-amylase 1 0.03 Orthogroups_2024-Update
evm.model.tig00000254.59 No alias (p16098|amyb_horvu : 219.0) Beta-amylase (EC 3.2.1.2)... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEA InterProScan predictions
MF GO:0016161 beta-amylase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000726 non-recombinational repair IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Predicted GO
BP GO:0006817 phosphate ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
CC GO:0015629 actin cytoskeleton IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001554 Glyco_hydro_14 91 498
No external refs found!