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  5. GRMZM2G082227

GRMZM2G082227


Description : AP2/B3-like transcriptional factor family protein


Gene families : OG_42_0000305 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000305_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G082227
Cluster HCCA clusters: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
At1g01030 No alias NGA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3T3] 0.04 Orthogroups_2024-Update
Bradi2g47220 No alias AP2/B3 transcription factor family protein 0.03 Orthogroups_2024-Update
Brara.C03374.1 No alias RAV/NGATHA-type transcription factor 0.04 Orthogroups_2024-Update
Brara.E02919.1 No alias RAV/NGATHA-type transcription factor 0.04 Orthogroups_2024-Update
Brara.F03325.1 No alias RAV/NGATHA-type transcription factor & AP2-RAV-type... 0.02 Orthogroups_2024-Update
Brara.H03121.1 No alias RAV/NGATHA-type transcription factor 0.03 Orthogroups_2024-Update
Brara.J00079.1 No alias RAV/NGATHA-type transcription factor 0.02 Orthogroups_2024-Update
Brara.J02597.1 No alias RAV/NGATHA-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G159592 No alias related to ABI3/VP1 1 0.03 Orthogroups_2024-Update
Glyma.01G087500 No alias AP2/B3 transcription factor family protein 0.05 Orthogroups_2024-Update
Glyma.02G099500 No alias AP2/B3 transcription factor family protein 0.04 Orthogroups_2024-Update
Glyma.03G199000 No alias AP2/B3-like transcriptional factor family protein 0.03 Orthogroups_2024-Update
Glyma.07G048200 No alias AP2/B3-like transcriptional factor family protein 0.03 Orthogroups_2024-Update
Glyma.10G204400 No alias AP2/B3 transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.19G261300 No alias AP2/B3-like transcriptional factor family protein 0.04 Orthogroups_2024-Update
HORVU3Hr1G010100.2 No alias RAV/NGATHA-type transcription factor & AP2-RAV-type... 0.04 Orthogroups_2024-Update
HORVU3Hr1G010140.3 No alias RAV/NGATHA-type transcription factor 0.02 Orthogroups_2024-Update
HORVU3Hr1G010190.5 No alias RAV/NGATHA-type transcription factor & AP2-RAV-type... 0.03 Orthogroups_2024-Update
HORVU3Hr1G010200.1 No alias RAV/NGATHA-type transcription factor 0.03 Orthogroups_2024-Update
HORVU3Hr1G010240.1 No alias RAV/NGATHA-type transcription factor & AP2-RAV-type... 0.02 Orthogroups_2024-Update
HORVU3Hr1G064640.4 No alias RAV/NGATHA-type transcription factor & AP2-RAV-type... 0.03 Orthogroups_2024-Update
LOC_Os01g04800 No alias B3 DNA binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g39190 No alias B3 DNA binding domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_178646g0010 No alias (at1g68840 : 271.0) Rav2 is part of a complex that has... 0.05 Orthogroups_2024-Update
PSME_00032471-RA No alias (at1g68840 : 300.0) Rav2 is part of a complex that has... 0.02 Orthogroups_2024-Update
PSME_00035556-RA No alias (at3g25730 : 293.0) ethylene response DNA binding factor... 0.07 Orthogroups_2024-Update
PSME_00048986-RA No alias (at1g25560 : 246.0) Encodes a member of the RAV... 0.03 Orthogroups_2024-Update
Potri.006G208100 No alias AP2/B3-like transcriptional factor family protein 0.03 Orthogroups_2024-Update
Potri.010G129200 No alias AP2/B3 transcription factor family protein 0.05 Orthogroups_2024-Update
Potri.016G074500 No alias AP2/B3-like transcriptional factor family protein 0.02 Orthogroups_2024-Update
Seita.3G158300.1 No alias RAV/NGATHA-type transcription factor & AP2-RAV-type... 0.02 Orthogroups_2024-Update
Seita.6G064600.1 No alias RAV/NGATHA-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G265200.1 No alias RAV/NGATHA-type transcription factor & AP2-RAV-type... 0.04 Orthogroups_2024-Update
Solyc04g007000 No alias AP2/B3 transcription factor family protein (AHRD V3.3... 0.06 Orthogroups_2024-Update
Solyc08g083400 No alias B3 domain-containing protein (AHRD V3.3 *-* W9RW19_9ROSA) 0.03 Orthogroups_2024-Update
Sopen04g002090 No alias B3 DNA binding domain 0.04 Orthogroups_2024-Update
Sopen05g005620 No alias B3 DNA binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 38 142
No external refs found!