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  5. GRMZM2G089562

GRMZM2G089562


Description : AT hook motif DNA-binding family protein


Gene families : OG_42_0000248 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000248_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G089562
Cluster HCCA clusters: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Bradi4g33850 No alias AT hook motif DNA-binding family protein 0.02 Orthogroups_2024-Update
Brara.I04225.1 No alias AHL clade-B transcription factor 0.03 Orthogroups_2024-Update
Glyma.09G260600 No alias AT hook motif DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.10G178000 No alias AT hook motif DNA-binding family protein 0.01 Orthogroups_2024-Update
Seita.1G373400.1 No alias AHL clade-B transcription factor 0.04 Orthogroups_2024-Update
Sobic.005G035000.1 No alias AHL clade-B transcription factor 0.03 Orthogroups_2024-Update
Sopen06g011190 No alias Domain of unknown function (DUF296) 0.02 Orthogroups_2024-Update
Sopen09g003710 No alias Domain of unknown function (DUF296) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000124 SAGA complex IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003713 transcription coactivator activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005795 Golgi stack IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
MF GO:0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009891 positive regulation of biosynthetic process IEP Predicted GO
BP GO:0009893 positive regulation of metabolic process IEP Predicted GO
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010628 positive regulation of gene expression IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0031325 positive regulation of cellular metabolic process IEP Predicted GO
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predicted GO
CC GO:0031984 organelle subcompartment IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
BP GO:0051254 positive regulation of RNA metabolic process IEP Predicted GO
CC GO:0098791 Golgi subcompartment IEP Predicted GO
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Predicted GO
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005175 PPC_dom 181 294
No external refs found!