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At1g25450


Description : 3-ketoacyl-CoA synthase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6L5]


Gene families : OG_42_0000099 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g25450
Cluster HCCA clusters: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
231244 No alias 3-ketoacyl-CoA synthase 4 0.03 Orthogroups_2024-Update
A4A49_37182 No alias 3-ketoacyl-coa synthase 20 0.03 Orthogroups_2024-Update
Brara.A00395.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.04 Orthogroups_2024-Update
MA_46113g0010 No alias (at2g26640 : 801.0) Encodes KCS11, a member of the... 0.03 Orthogroups_2024-Update
Pp1s28_28V6 No alias beta-ketoacyl-coa synthase family protein 0.02 Orthogroups_2024-Update
Solyc09g065780 No alias 3-ketoacyl-CoA synthase (AHRD V3.3 *** K4CUK4_SOLLC) 0.02 Orthogroups_2024-Update
Solyc12g056720 No alias 3-ketoacyl-CoA synthase (AHRD V3.3 *** K4DG03_SOLLC) 0.03 Orthogroups_2024-Update
Sopen05g005030 No alias FAE1/Type III polyketide synthase-like protein 0.02 Orthogroups_2024-Update
Sopen05g007950 No alias FAE1/Type III polyketide synthase-like protein 0.02 Orthogroups_2024-Update
Sopen06g024120 No alias FAE1/Type III polyketide synthase-like protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
InterPro domains Description Start Stop
IPR013601 FAE1_typ3_polyketide_synth 76 364
IPR013747 ACP_syn_III_C 380 462
No external refs found!