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GRMZM2G100872


Description : radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein


Gene families : OG_42_0004000 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004000_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G100872
Cluster HCCA clusters: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
Cre07.g354100 No alias radical SAM domain-containing protein / GCN5-related... 0.02 Orthogroups_2024-Update
Sobic.006G125900.1 No alias EC_2.3 acyltransferase & component *(ELP3) of ELONGATOR... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0051536 iron-sulfur cluster binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000176 nuclear exosome (RNase complex) IEP Predicted GO
CC GO:0000178 exosome (RNase complex) IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0017069 snRNA binding IEP Predicted GO
MF GO:0017070 U6 snRNA binding IEP Predicted GO
MF GO:0030623 U5 snRNA binding IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
CC GO:1905354 exoribonuclease complex IEP Predicted GO
InterPro domains Description Start Stop
IPR007197 rSAM 130 324
IPR032432 Radical_SAM_C 336 414
IPR000182 GNAT_dom 423 558
No external refs found!