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  5. At1g26880

At1g26880


Description : 60S ribosomal protein L34-1 [Source:UniProtKB/Swiss-Prot;Acc:Q42351]


Gene families : OG_42_0001465 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001465_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g26880
Cluster HCCA clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
113433 No alias Ribosomal protein L34e superfamily protein 0.03 Orthogroups_2024-Update
A4A49_12213 No alias 60s ribosomal protein l34 0.05 Orthogroups_2024-Update
A4A49_36196 No alias 60s ribosomal protein l34 0.05 Orthogroups_2024-Update
Bradi3g16600 No alias Ribosomal protein L34e superfamily protein 0.08 Orthogroups_2024-Update
Bradi3g16620 No alias Ribosomal protein L34e superfamily protein 0.06 Orthogroups_2024-Update
Bradi3g37060 No alias Ribosomal protein L34e superfamily protein 0.03 Orthogroups_2024-Update
Brara.B01869.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Brara.G02472.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.12 Orthogroups_2024-Update
Brara.G02897.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Brara.I00329.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Cre16.g661050 No alias Ribosomal protein L34e superfamily protein 0.11 Orthogroups_2024-Update
Glyma.01G047000 No alias Ribosomal protein L34e superfamily protein 0.1 Orthogroups_2024-Update
Glyma.02G107100 No alias Ribosomal protein L34e superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G301300 No alias Ribosomal protein L34e superfamily protein 0.09 Orthogroups_2024-Update
Glyma.09G239000 No alias Ribosomal protein L34e superfamily protein 0.07 Orthogroups_2024-Update
HORVU2Hr1G080340.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
HORVU5Hr1G066000.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Kfl00598_0060 kfl00598_0060_v1.1 (p40590|rl34_pea : 144.0) 60S ribosomal protein L34 -... 0.03 Orthogroups_2024-Update
LOC_Os08g33920 No alias 60S ribosomal protein L34, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g24690 No alias 60S ribosomal protein L34, putative, expressed 0.03 Orthogroups_2024-Update
MA_175574g0010 No alias (p41098|rl34_tobac : 177.0) 60S ribosomal protein L34 -... 0.06 Orthogroups_2024-Update
Mp4g17040.1 No alias component RPL34 of LSU proteome component 0.09 Orthogroups_2024-Update
PSME_00038465-RA No alias (p41098|rl34_tobac : 177.0) 60S ribosomal protein L34 -... 0.09 Orthogroups_2024-Update
Potri.012G108400 No alias Ribosomal protein L34e superfamily protein 0.07 Orthogroups_2024-Update
Potri.015G106500 No alias Ribosomal protein L34e superfamily protein 0.05 Orthogroups_2024-Update
Potri.017G082200 No alias Ribosomal protein L34e superfamily protein 0.05 Orthogroups_2024-Update
Pp1s200_25V6 No alias 60s ribosomal protein l34 0.02 Orthogroups_2024-Update
Pp1s39_344V6 No alias 60s ribosomal protein 0.12 Orthogroups_2024-Update
Pp1s39_364V6 No alias 60s ribosomal protein 0.02 Orthogroups_2024-Update
Pp1s57_72V6 No alias 60s ribosomal protein 0.03 Orthogroups_2024-Update
Pp1s76_47V6 No alias 60s ribosomal protein l34 0.1 Orthogroups_2024-Update
Seita.2G204000.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Seita.6G160000.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Seita.7G124100.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
Sobic.007G138700.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Solyc02g087930 No alias 60S ribosomal protein L34 (AHRD V3.3 *** RL34_TOBAC) 0.03 Orthogroups_2024-Update
Solyc05g007560 No alias 60S ribosomal protein L34 (AHRD V3.3 *** RL34_TOBAC) 0.05 Orthogroups_2024-Update
Solyc06g069860 No alias 60S ribosomal protein L34 (AHRD V3.3 *** RL34_TOBAC) 0.09 Orthogroups_2024-Update
Sopen05g003450 No alias Ribosomal protein L34e 0.09 Orthogroups_2024-Update
Sopen06g027130 No alias Ribosomal protein L34e 0.07 Orthogroups_2024-Update
evm.model.contig_445.6 No alias (p41098|rl34_tobac : 125.0) 60S ribosomal protein L34 -... 0.09 Orthogroups_2024-Update
evm.model.tig00000632.3 No alias (at1g26880 : 109.0) Ribosomal protein L34e superfamily... 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0004592 pantoate-beta-alanine ligase activity IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0015939 pantothenate metabolic process IEP Predicted GO
BP GO:0015940 pantothenate biosynthetic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030515 snoRNA binding IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
CC GO:1902495 transmembrane transporter complex IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
CC GO:1990351 transporter complex IEP Predicted GO
InterPro domains Description Start Stop
IPR008195 Ribosomal_L34Ae 1 96
No external refs found!