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  5. GRMZM2G104983

GRMZM2G104983


Description : binding


Gene families : OG_42_0004614 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004614_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G104983
Cluster HCCA clusters: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Cre16.g659600 No alias binding 0.01 Orthogroups_2024-Update
Seita.9G362800.1 No alias component *(NOC3) of ribosomal-subunit proteome nuclear... 0.03 Orthogroups_2024-Update
Sobic.001G335300.1 No alias component *(NOC3) of ribosomal-subunit proteome nuclear... 0.03 Orthogroups_2024-Update
Solyc04g074090 No alias Nucleolar complex protein 3 like (AHRD V3.3 *** A0A0B2PDL3_GLYSO) 0.03 Orthogroups_2024-Update
Sopen00g012990 No alias CBF/Mak21 family 0.03 Orthogroups_2024-Update
evm.model.contig_2016.5 No alias (at1g79150 : 103.0) binding; FUNCTIONS IN: binding;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
CC GO:1905354 exoribonuclease complex IEP Predicted GO
InterPro domains Description Start Stop
IPR011501 Noc3_N 202 292
IPR005612 CCAAT-binding_factor 561 716
No external refs found!