Description : 60S acidic ribosomal protein family
Gene families : OG_42_0001058 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001058_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Zea release: GRMZM2G105712 | |
Cluster | HCCA clusters: Cluster_225 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Brara.D01652.1 | No alias | component *(RPP2) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
Brara.G01325.1 | No alias | component *(RPP2) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
HORVU1Hr1G073640.1 | No alias | component *(RPP2) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
PSME_00022751-RA | No alias | (o24415|rla2b_maize : 100.0) 60S acidic ribosomal... | 0.03 | Orthogroups_2024-Update | |
PSME_00050387-RA | No alias | (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
Potri.004G185800 | No alias | 60S acidic ribosomal protein family | 0.03 | Orthogroups_2024-Update | |
Potri.009G146200 | No alias | 60S acidic ribosomal protein family | 0.03 | Orthogroups_2024-Update | |
Pp1s21_165V6 | No alias | 60s acidic ribosomal protein | 0.02 | Orthogroups_2024-Update | |
Pp1s51_319V6 | No alias | 60s acidic ribosomal protein | 0.02 | Orthogroups_2024-Update | |
Sobic.009G242300.3 | No alias | component *(RPP2) of large ribosomal-subunit (LSU) proteome | 0.02 | Orthogroups_2024-Update | |
Solyc11g067100 | No alias | 60s acidic ribosomal family protein (AHRD V3.3 *** A9PCM7_POPTR) | 0.03 | Orthogroups_2024-Update | |
Sopen06g030910 | No alias | 60s Acidic ribosomal protein | 0.02 | Orthogroups_2024-Update | |
evm.model.contig_2346.3 | No alias | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update | |
evm.model.contig_3407.5 | No alias | no hits & (original description: no original description) | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
CC | GO:0005622 | intracellular | IEP | Predicted GO |
CC | GO:0005840 | ribosome | IEP | Predicted GO |
CC | GO:0005856 | cytoskeleton | IEP | Predicted GO |
BP | GO:0006412 | translation | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
MF | GO:0008565 | protein transporter activity | IEP | Predicted GO |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
MF | GO:0016462 | pyrophosphatase activity | IEP | Predicted GO |
MF | GO:0016597 | amino acid binding | IEP | Predicted GO |
MF | GO:0016743 | carboxyl- or carbamoyltransferase activity | IEP | Predicted GO |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Predicted GO |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Predicted GO |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Predicted GO |
MF | GO:0031406 | carboxylic acid binding | IEP | Predicted GO |
MF | GO:0032977 | membrane insertase activity | IEP | Predicted GO |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
MF | GO:0043177 | organic acid binding | IEP | Predicted GO |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
No InterPro domains available for this sequence
No external refs found! |