GRMZM2G105712


Description : 60S acidic ribosomal protein family


Gene families : OG_42_0001058 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001058_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G105712
Cluster HCCA clusters: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
Brara.D01652.1 No alias component *(RPP2) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.G01325.1 No alias component *(RPP2) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
HORVU1Hr1G073640.1 No alias component *(RPP2) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
PSME_00022751-RA No alias (o24415|rla2b_maize : 100.0) 60S acidic ribosomal... 0.03 Orthogroups_2024-Update
PSME_00050387-RA No alias (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.004G185800 No alias 60S acidic ribosomal protein family 0.03 Orthogroups_2024-Update
Potri.009G146200 No alias 60S acidic ribosomal protein family 0.03 Orthogroups_2024-Update
Pp1s21_165V6 No alias 60s acidic ribosomal protein 0.02 Orthogroups_2024-Update
Pp1s51_319V6 No alias 60s acidic ribosomal protein 0.02 Orthogroups_2024-Update
Sobic.009G242300.3 No alias component *(RPP2) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Solyc11g067100 No alias 60s acidic ribosomal family protein (AHRD V3.3 *** A9PCM7_POPTR) 0.03 Orthogroups_2024-Update
Sopen06g030910 No alias 60s Acidic ribosomal protein 0.02 Orthogroups_2024-Update
evm.model.contig_2346.3 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
evm.model.contig_3407.5 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
CC GO:0005856 cytoskeleton IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0032977 membrane insertase activity IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!