Coexpression cluster: Cluster_225 (HCCA clusters)

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Average Expression Profile



Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006396 RNA processing 8.89% (4/45) 4.7 1.8e-05 0.002393
GO:0071824 protein-DNA complex subunit organization 4.44% (2/45) 6.6 0.000197 0.003326
GO:0003723 RNA binding 8.89% (4/45) 3.82 0.000189 0.003638
GO:0065004 protein-DNA complex assembly 4.44% (2/45) 6.65 0.000184 0.00413
GO:0034728 nucleosome organization 4.44% (2/45) 6.65 0.000184 0.00413
GO:0004521 endoribonuclease activity 4.44% (2/45) 6.21 0.00034 0.005098
GO:0006334 nucleosome assembly 4.44% (2/45) 6.71 0.000171 0.005755
GO:0004540 ribonuclease activity 4.44% (2/45) 5.88 0.000543 0.006107
GO:0006364 rRNA processing 4.44% (2/45) 5.94 0.000499 0.006119
GO:0016072 rRNA metabolic process 4.44% (2/45) 5.94 0.000499 0.006119
GO:0004519 endonuclease activity 4.44% (2/45) 5.79 0.000613 0.006364
GO:0071821 FANCM-MHF complex 2.22% (1/45) 10.46 0.000709 0.006836
GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters 4.44% (2/45) 6.76 0.000158 0.007109
GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters 4.44% (2/45) 6.76 0.000158 0.007109
GO:0016070 RNA metabolic process 8.89% (4/45) 3.27 0.000793 0.007141
GO:0003676 nucleic acid binding 15.56% (7/45) 2.1 0.001129 0.008025
GO:0097159 organic cyclic compound binding 24.44% (11/45) 1.52 0.0011 0.008251
GO:1901363 heterocyclic compound binding 24.44% (11/45) 1.52 0.0011 0.008251
GO:0034622 cellular protein-containing complex assembly 4.44% (2/45) 5.27 0.001251 0.008442
GO:0006325 chromatin organization 4.44% (2/45) 5.42 0.001024 0.00864
GO:0065003 protein-containing complex assembly 4.44% (2/45) 5.16 0.001462 0.0094
GO:0034470 ncRNA processing 4.44% (2/45) 4.99 0.00185 0.011353
GO:0043933 protein-containing complex subunit organization 4.44% (2/45) 4.85 0.002237 0.012077
GO:0005488 binding 31.11% (14/45) 1.17 0.002193 0.012336
GO:0090304 nucleic acid metabolic process 8.89% (4/45) 2.87 0.002167 0.012722
GO:0000178 exosome (RNase complex) 2.22% (1/45) 8.46 0.002833 0.012747
GO:1905354 exoribonuclease complex 2.22% (1/45) 8.46 0.002833 0.012747
GO:0006471 protein ADP-ribosylation 2.22% (1/45) 8.46 0.002833 0.012747
GO:0022607 cellular component assembly 4.44% (2/45) 4.76 0.002513 0.013051
GO:0004518 nuclease activity 4.44% (2/45) 4.71 0.002707 0.013533
GO:0003950 NAD+ ADP-ribosyltransferase activity 2.22% (1/45) 8.14 0.00354 0.015414
GO:0006139 nucleobase-containing compound metabolic process 8.89% (4/45) 2.52 0.005128 0.021634
GO:0034660 ncRNA metabolic process 4.44% (2/45) 4.06 0.00647 0.024264
GO:0032296 double-stranded RNA-specific ribonuclease activity 2.22% (1/45) 7.29 0.006362 0.02454
GO:0004525 ribonuclease III activity 2.22% (1/45) 7.29 0.006362 0.02454
GO:0005759 mitochondrial matrix 2.22% (1/45) 7.29 0.006362 0.02454
GO:0043233 organelle lumen 2.22% (1/45) 7.0 0.007771 0.024977
GO:0031974 membrane-enclosed lumen 2.22% (1/45) 7.0 0.007771 0.024977
GO:0070013 intracellular organelle lumen 2.22% (1/45) 7.0 0.007771 0.024977
GO:0016763 transferase activity, transferring pentosyl groups 2.22% (1/45) 7.14 0.007067 0.025784
GO:1901360 organic cyclic compound metabolic process 8.89% (4/45) 2.33 0.008217 0.025797
GO:0032040 small-subunit processome 2.22% (1/45) 6.88 0.008474 0.026001
GO:0046483 heterocycle metabolic process 8.89% (4/45) 2.37 0.007488 0.0266
GO:0006725 cellular aromatic compound metabolic process 8.89% (4/45) 2.35 0.00775 0.026826
GO:0030684 preribosome 2.22% (1/45) 6.56 0.010582 0.031746
GO:0044424 intracellular part 11.11% (5/45) 1.87 0.011475 0.032961
GO:0004523 RNA-DNA hybrid ribonuclease activity 2.22% (1/45) 6.46 0.011283 0.033114
GO:0044464 cell part 11.11% (5/45) 1.78 0.014923 0.041969
GO:0140098 catalytic activity, acting on RNA 4.44% (2/45) 3.31 0.017513 0.047286
GO:0043170 macromolecule metabolic process 15.56% (7/45) 1.37 0.0174 0.047938
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_26 0.043 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_67 0.021 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_96 0.028 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_137 0.02 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_157 0.034 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_236 0.02 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_298 0.034 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_29 0.057 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_113 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_259 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_6 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_8 0.025 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_12 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_31 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_56 0.024 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_131 0.021 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_132 0.03 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_8 0.02 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_19 0.022 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_20 0.024 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_150 0.02 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_216 0.033 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_263 0.02 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_298 0.023 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_8 0.028 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_54 0.022 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_95 0.02 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_26 0.02 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_108 0.02 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_207 0.021 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_212 0.02 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_482 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_34 0.022 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_57 0.049 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_59 0.025 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_84 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_132 0.025 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_188 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_236 0.028 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_241 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_84 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_109 0.048 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_158 0.029 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_440 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_12 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_140 0.028 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_35 0.021 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0059 0.028 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0027 0.021 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0029 0.021 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0068 0.034 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0083 0.028 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0134 0.027 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_10 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_24 0.035 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_32 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_66 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_106 0.033 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_114 0.043 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_118 0.026 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_197 0.031 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_212 0.026 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_254 0.024 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_264 0.038 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_326 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_117 0.027 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_121 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_297 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_66 0.038 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_124 0.033 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_164 0.023 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_216 0.027 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_239 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_259 0.057 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_45 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_54 0.021 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_75 0.039 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_104 0.022 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_138 0.058 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_261 0.033 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_23 0.022 Orthogroups_2024-Update Compare
Sequences (45) (download table)



InterPro Domains



GO Terms



Family Terms