Coexpression cluster: Cluster_20 (HCCA clusters)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003735 structural constituent of ribosome 13.28% (17/128) 4.22 0.0 0.0
GO:0005198 structural molecule activity 13.28% (17/128) 4.1 0.0 0.0
GO:1990904 ribonucleoprotein complex 13.28% (17/128) 4.11 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 14.84% (19/128) 3.72 0.0 0.0
GO:0043043 peptide biosynthetic process 12.5% (16/128) 4.15 0.0 0.0
GO:0006412 translation 12.5% (16/128) 4.16 0.0 0.0
GO:0005840 ribosome 12.5% (16/128) 4.17 0.0 0.0
GO:0009059 macromolecule biosynthetic process 14.84% (19/128) 3.62 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 12.5% (16/128) 4.07 0.0 0.0
GO:0043228 non-membrane-bounded organelle 12.5% (16/128) 4.07 0.0 0.0
GO:0043604 amide biosynthetic process 12.5% (16/128) 4.08 0.0 0.0
GO:0006518 peptide metabolic process 12.5% (16/128) 4.05 0.0 0.0
GO:0044444 cytoplasmic part 14.84% (19/128) 3.54 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 14.84% (19/128) 3.52 0.0 0.0
GO:0043603 cellular amide metabolic process 12.5% (16/128) 3.98 0.0 0.0
GO:0043226 organelle 14.84% (19/128) 3.19 0.0 0.0
GO:0043229 intracellular organelle 14.84% (19/128) 3.19 0.0 0.0
GO:0044424 intracellular part 18.75% (24/128) 2.66 0.0 0.0
GO:0044464 cell part 19.53% (25/128) 2.54 0.0 0.0
GO:0032991 protein-containing complex 15.62% (20/128) 2.95 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 12.5% (16/128) 3.36 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 15.62% (20/128) 2.82 0.0 0.0
GO:0005622 intracellular 8.59% (11/128) 4.23 0.0 0.0
GO:0044249 cellular biosynthetic process 14.84% (19/128) 2.81 0.0 0.0
GO:0009058 biosynthetic process 15.62% (20/128) 2.66 0.0 0.0
GO:1901576 organic substance biosynthetic process 14.84% (19/128) 2.72 0.0 0.0
GO:0005575 cellular_component 21.09% (27/128) 1.53 0.0 4e-06
GO:0003723 RNA binding 5.47% (7/128) 2.95 3.6e-05 0.000302
GO:0009987 cellular process 21.09% (27/128) 1.02 0.000263 0.002103
GO:0044260 cellular macromolecule metabolic process 14.84% (19/128) 1.24 0.000398 0.003074
GO:0044237 cellular metabolic process 17.97% (23/128) 1.08 0.000471 0.003527
GO:0043170 macromolecule metabolic process 16.41% (21/128) 1.13 0.000547 0.003963
GO:0044267 cellular protein metabolic process 12.5% (16/128) 1.28 0.000883 0.006208
GO:0006351 transcription, DNA-templated 2.34% (3/128) 3.88 0.001109 0.007145
GO:0097659 nucleic acid-templated transcription 2.34% (3/128) 3.88 0.001109 0.007145
GO:0006807 nitrogen compound metabolic process 16.41% (21/128) 1.05 0.001079 0.007363
GO:0019538 protein metabolic process 13.28% (17/128) 1.14 0.00179 0.010925
GO:0019843 rRNA binding 1.56% (2/128) 4.99 0.001752 0.010985
GO:0006413 translational initiation 1.56% (2/128) 4.78 0.002344 0.013941
GO:0032774 RNA biosynthetic process 2.34% (3/128) 3.3 0.003562 0.02066
GO:0030176 integral component of endoplasmic reticulum membrane 0.78% (1/128) 7.69 0.004842 0.024419
GO:0031227 intrinsic component of endoplasmic reticulum membrane 0.78% (1/128) 7.69 0.004842 0.024419
GO:0019348 dolichol metabolic process 0.78% (1/128) 7.69 0.004842 0.024419
GO:0016093 polyprenol metabolic process 0.78% (1/128) 7.69 0.004842 0.024419
GO:0046961 proton-transporting ATPase activity, rotational mechanism 0.78% (1/128) 7.69 0.004842 0.024419
GO:0036442 proton-exporting ATPase activity 0.78% (1/128) 7.69 0.004842 0.024419
GO:0003743 translation initiation factor activity 1.56% (2/128) 4.17 0.005506 0.027177
GO:1901564 organonitrogen compound metabolic process 13.28% (17/128) 0.92 0.00829 0.040068
GO:0016070 RNA metabolic process 3.12% (4/128) 2.26 0.009884 0.044963
GO:0006457 protein folding 1.56% (2/128) 3.74 0.009867 0.045783
GO:0008135 translation factor activity, RNA binding 1.56% (2/128) 3.74 0.009867 0.045783
GO:0044238 primary metabolic process 17.19% (22/128) 0.74 0.011081 0.049439
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_26 0.028 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_55 0.041 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_102 0.039 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_113 0.026 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_177 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_58 0.076 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_84 0.041 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_110 0.02 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_122 0.024 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_231 0.024 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_8 0.03 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_25 0.023 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_70 0.023 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_99 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_104 0.033 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_132 0.022 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_141 0.023 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_186 0.021 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_58 0.064 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_126 0.022 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_24 0.044 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_47 0.021 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_85 0.02 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_98 0.022 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_111 0.022 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_7 0.033 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_13 0.041 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_64 0.049 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_72 0.021 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_87 0.062 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_130 0.039 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_147 0.042 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_149 0.021 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_166 0.021 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_171 0.021 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_298 0.049 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_25 0.084 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_23 0.029 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_54 0.037 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_87 0.024 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_7 0.024 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_26 0.021 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_45 0.079 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_117 0.038 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_121 0.031 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_133 0.027 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_183 0.025 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_193 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_42 0.022 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_57 0.069 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_132 0.04 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_49 0.041 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_76 0.074 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_93 0.036 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_149 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_158 0.05 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_192 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_212 0.048 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_236 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_300 0.025 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_334 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_342 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_345 0.026 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_435 0.021 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_29 0.053 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_21 0.06 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_35 0.038 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_225 0.024 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0021 0.03 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0027 0.022 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0071 0.021 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0078 0.029 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0083 0.033 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0089 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_8 0.046 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_10 0.061 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_32 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_77 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_91 0.024 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_102 0.026 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_114 0.037 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_117 0.025 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_118 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_146 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_167 0.043 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_238 0.029 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_249 0.023 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_254 0.025 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_40 0.06 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_61 0.02 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_131 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_145 0.045 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_168 0.02 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_224 0.028 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_246 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_24 0.072 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_43 0.029 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_48 0.022 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_75 0.025 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_124 0.03 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_174 0.03 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_37 0.062 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_75 0.034 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_138 0.027 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_176 0.02 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_265 0.025 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_18 0.03 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_44 0.031 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_61 0.055 Orthogroups_2024-Update Compare
Sequences (128) (download table)

InterPro Domains

GO Terms

Family Terms