At1g29160

Description : Uncharacterized protein At1g29160 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUY0]

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At1g29160
Cluster	HCCA clusters: Cluster_118

Target	Alias	Description	ECC score	Gene Family Method
A4A49_12086	No alias	cyclic dof factor 2	0.03	Orthogroups_2024-Update
Brara.H02152.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Cre12.g521150	No alias	cycling DOF factor 2	0.02	Orthogroups_2024-Update
Glyma.02G062700	No alias	OBF binding protein 1	0.03	Orthogroups_2024-Update
Glyma.13G062500	No alias	cycling DOF factor 2	0.04	Orthogroups_2024-Update
Glyma.13G237500	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
HORVU3Hr1G116220.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
HORVU4Hr1G074990.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
PSME_00041316-RA	No alias	(at5g39660 : 139.0) Dof-type zinc finger...	0.02	Orthogroups_2024-Update
Potri.004G121800	No alias	cycling DOF factor 2	0.03	Orthogroups_2024-Update
Potri.008G087800	No alias	cycling DOF factor 2	0.04	Orthogroups_2024-Update
Potri.011G047500	No alias	OBF binding protein 4	0.03	Orthogroups_2024-Update
Pp1s392_2V6	No alias	zinc finger	0.03	Orthogroups_2024-Update
Pp1s69_113V6	No alias	zinc finger	0.02	Orthogroups_2024-Update
Seita.6G192200.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Sobic.001G034300.3	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Sobic.002G421900.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Solyc02g078620	No alias	Dof zinc finger protein (AHRD V3.3 *** W9RD26_9ROSA)	0.02	Orthogroups_2024-Update
Sopen02g022790	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEP	Predicted GO
BP	GO:0002682	regulation of immune system process	IEP	Predicted GO
BP	GO:0002831	regulation of response to biotic stimulus	IEP	Predicted GO
MF	GO:0003747	translation release factor activity	IEP	Predicted GO
MF	GO:0003872	6-phosphofructokinase activity	IEP	Predicted GO
MF	GO:0004559	alpha-mannosidase activity	IEP	Predicted GO
MF	GO:0005338	nucleotide-sugar transmembrane transporter activity	IEP	Predicted GO
BP	GO:0006013	mannose metabolic process	IEP	Predicted GO
BP	GO:0006415	translational termination	IEP	Predicted GO
MF	GO:0008079	translation termination factor activity	IEP	Predicted GO
MF	GO:0008443	phosphofructokinase activity	IEP	Predicted GO
BP	GO:0010112	regulation of systemic acquired resistance	IEP	Predicted GO
MF	GO:0015165	pyrimidine nucleotide-sugar transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015780	nucleotide-sugar transmembrane transport	IEP	Predicted GO
MF	GO:0015923	mannosidase activity	IEP	Predicted GO
MF	GO:0019200	carbohydrate kinase activity	IEP	Predicted GO
BP	GO:0019751	polyol metabolic process	IEP	Predicted GO
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	Predicted GO
BP	GO:0022411	cellular component disassembly	IEP	Predicted GO
BP	GO:0031347	regulation of defense response	IEP	Predicted GO
BP	GO:0032101	regulation of response to external stimulus	IEP	Predicted GO
BP	GO:0032958	inositol phosphate biosynthetic process	IEP	Predicted GO
BP	GO:0032984	protein-containing complex disassembly	IEP	Predicted GO
MF	GO:0043015	gamma-tubulin binding	IEP	Predicted GO
BP	GO:0043624	cellular protein complex disassembly	IEP	Predicted GO
BP	GO:0043647	inositol phosphate metabolic process	IEP	Predicted GO
BP	GO:0043900	regulation of multi-organism process	IEP	Predicted GO
BP	GO:0045088	regulation of innate immune response	IEP	Predicted GO
BP	GO:0046165	alcohol biosynthetic process	IEP	Predicted GO
BP	GO:0046173	polyol biosynthetic process	IEP	Predicted GO
BP	GO:0050776	regulation of immune response	IEP	Predicted GO
BP	GO:0080134	regulation of response to stress	IEP	Predicted GO
BP	GO:0090481	pyrimidine nucleotide-sugar transmembrane transport	IEP	Predicted GO
BP	GO:1901264	carbohydrate derivative transport	IEP	Predicted GO
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	60	115

External Links

No external refs found!

At1g29160

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation