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  5. GRMZM2G118697

GRMZM2G118697


Description : cleavage and polyadenylation specificity factor 160


Gene families : OG_42_0004693 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004693_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G118697
Cluster HCCA clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Glyma.16G203900 No alias cleavage and polyadenylation specificity factor 160 0.03 Orthogroups_2024-Update
Seita.7G028600.1 No alias component *(CPSF160/Yhh1) of Cleavage and... 0.02 Orthogroups_2024-Update
Solyc03g007100 No alias Cleavage and polyadenylation specificity factor subunit... 0.02 Orthogroups_2024-Update
evm.model.contig_4449.6 No alias (at5g51660 : 178.0) cleavage and polyadenylation... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0004150 dihydroneopterin aldolase activity IEP Predicted GO
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
BP GO:0006144 purine nucleobase metabolic process IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
BP GO:0009113 purine nucleobase biosynthetic process IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004871 Cleavage/polyA-sp_fac_asu_C 2 118
No external refs found!