GRMZM2G123537

Description : pumilio 4

Gene families : OG_42_0001049 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001049_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G123537
Cluster	HCCA clusters: Cluster_114

Target	Alias	Description	ECC score	Gene Family Method	Actions
Glyma.15G035900	No alias	pumilio 2	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Predicted GO
BP	GO:0006302	double-strand break repair	IEP	Predicted GO
MF	GO:0030145	manganese ion binding	IEP	Predicted GO
MF	GO:0051011	microtubule minus-end binding	IEP	Predicted GO
MF	GO:0070001	aspartic-type peptidase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR012940	NABP	308	667
IPR001313	Pumilio_RNA-bd_rpt	888	919
IPR001313	Pumilio_RNA-bd_rpt	814	841
IPR001313	Pumilio_RNA-bd_rpt	936	962
IPR001313	Pumilio_RNA-bd_rpt	854	884
IPR001313	Pumilio_RNA-bd_rpt	786	811
IPR001313	Pumilio_RNA-bd_rpt	670	703
IPR001313	Pumilio_RNA-bd_rpt	706	738
IPR001313	Pumilio_RNA-bd_rpt	742	773

External Links

No external refs found!