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  5. GRMZM2G126260

GRMZM2G126260


Description : Auxin efflux carrier family protein


Gene families : OG_42_0000235 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000235_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G126260
Cluster HCCA clusters: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
102666 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
A4A49_08912 No alias auxin efflux carrier component 5 0.03 Orthogroups_2024-Update
A4A49_35848 No alias hypothetical protein 0.03 Orthogroups_2024-Update
At1g70940 No alias Auxin efflux carrier component 3... 0.02 Orthogroups_2024-Update
At5g57090 No alias Auxin efflux carrier component 2... 0.02 Orthogroups_2024-Update
Glyma.07G164600 No alias Auxin efflux carrier family protein 0.02 Orthogroups_2024-Update
PSME_00016874-RA No alias (at1g70940 : 775.0) A regulator of auxin efflux and... 0.03 Orthogroups_2024-Update
PSME_00036388-RA No alias (at1g70940 : 405.0) A regulator of auxin efflux and... 0.02 Orthogroups_2024-Update
Seita.4G101300.1 No alias auxin efflux transporter *(PIN) & auxin transporter *(PIN) 0.02 Orthogroups_2024-Update
Sobic.010G095100.1 No alias auxin transporter *(PIN) & auxin efflux transporter *(PIN) 0.03 Orthogroups_2024-Update
Solyc05g008060 No alias SlPIN4 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004776 Mem_trans 85 678
No external refs found!