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At1g31010


Description : Protein OSB4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FYJ2]


Gene families : OG_42_0002038 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002038_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g31010
Cluster HCCA clusters: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Bradi1g14220 No alias Primosome PriB/single-strand DNA-binding 0.04 Orthogroups_2024-Update
Brara.I02757.1 No alias cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.04 Orthogroups_2024-Update
GRMZM2G128432 No alias Primosome PriB/single-strand DNA-binding 0.02 Orthogroups_2024-Update
LOC_Os03g43420 No alias single-stranded DNA-binding protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.001G394200 No alias plastid transcriptionally active 9 0.02 Orthogroups_2024-Update
Sobic.001G161400.1 No alias ssDNA-binding protein *(OSB) 0.04 Orthogroups_2024-Update
Sopen09g002310 No alias Single-strand binding protein family 0.05 Orthogroups_2024-Update
Sopen09g027630 No alias Single-strand binding protein family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006553 lysine metabolic process IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0008837 diaminopimelate epimerase activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009085 lysine biosynthetic process IEP Predicted GO
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0046451 diaminopimelate metabolic process IEP Predicted GO
MF GO:0047661 amino-acid racemase activity IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
InterPro domains Description Start Stop
IPR000424 Primosome_PriB/ssb 73 159
No external refs found!