GRMZM2G159397

Description : K-box region and MADS-box transcription factor family protein

Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G159397
Cluster	HCCA clusters: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method
At2g22630	No alias	AGL17 [Source:UniProtKB/TrEMBL;Acc:A0A178W215]	0.03	Orthogroups_2024-Update
At3g61120	No alias	Agamous-like MADS-box protein AGL13...	0.02	Orthogroups_2024-Update
At4g36590	No alias	MADS-box protein [Source:UniProtKB/TrEMBL;Acc:O23222]	0.04	Orthogroups_2024-Update
At4g37940	No alias	Agamous-like MADS-box protein AGL21...	0.03	Orthogroups_2024-Update
Brara.A03890.1	No alias	regulatory protein *(SEPALLATA) of floral meristem...	0.03	Orthogroups_2024-Update
Brara.D01347.1	No alias	MADS/AGL-type transcription factor	0.03	Orthogroups_2024-Update
Cre11.g467577	No alias	AGAMOUS-like 79	0.01	Orthogroups_2024-Update
GRMZM2G097059	No alias	K-box region and MADS-box transcription factor family protein	0.04	Orthogroups_2024-Update
Glyma.17G080900	No alias	K-box region and MADS-box transcription factor family protein	0.03	Orthogroups_2024-Update
Glyma.17G081200	No alias	AGAMOUS-like 8	0.03	Orthogroups_2024-Update
HORVU3Hr1G091000.8	No alias	component *(PISTILLATA) of AP3-PISTILLATA organ-identity...	0.03	Orthogroups_2024-Update
LOC_Os02g45770	No alias	OsMADS6 - MADS-box family gene with MIKCc type-box, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g06750	No alias	OsMADS5 - MADS-box family gene with MIKCc type-box, expressed	0.02	Orthogroups_2024-Update
MA_333471g0010	No alias	(at2g45660 : 106.0) Controls flowering and is required...	0.03	Orthogroups_2024-Update
Potri.014G074200	No alias	AGAMOUS-like 20	0.03	Orthogroups_2024-Update
Pp1s118_161V6	No alias	mikc* mads-box transcription factor	0.02	Orthogroups_2024-Update
Pp1s209_130V6	No alias	mads-box transcription factor	0.02	Orthogroups_2024-Update
Seita.1G272300.1	No alias	MADS/AGL-type transcription factor	0.02	Orthogroups_2024-Update
Seita.4G177800.1	No alias	MADS/AGL-type transcription factor	0.02	Orthogroups_2024-Update
Seita.6G223400.1	No alias	regulatory protein *(SEPALLATA) of floral meristem...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000030	mannosyltransferase activity	IEP	Predicted GO
MF	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	IEP	Predicted GO
MF	GO:0008107	galactoside 2-alpha-L-fucosyltransferase activity	IEP	Predicted GO
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	Predicted GO
MF	GO:0016728	oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor	IEP	Predicted GO
CC	GO:0030176	integral component of endoplasmic reticulum membrane	IEP	Predicted GO
MF	GO:0031127	alpha-(1,2)-fucosyltransferase activity	IEP	Predicted GO
CC	GO:0031227	intrinsic component of endoplasmic reticulum membrane	IEP	Predicted GO
BP	GO:0042546	cell wall biogenesis	IEP	Predicted GO
MF	GO:0061731	ribonucleoside-diphosphate reductase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002487	TF_Kbox	86	174
IPR002100	TF_MADSbox	10	57

External Links

No external refs found!

GRMZM2G159397

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation