GRMZM2G162119

Description : U2 snRNP auxiliary factor small subunit, putative

Gene families : OG_42_0001056 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001056_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM2G162119
Cluster	HCCA clusters: Cluster_185

Target	Alias	Description	ECC score	Gene Family Method	Actions
Bradi2g16520	No alias	U2 snRNP auxiliary factor small subunit, putative	0.02	Orthogroups_2024-Update
Glyma.12G181300	No alias	Zinc finger C-x8-C-x5-C-x3-H type family protein	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0009116	nucleoside metabolic process	IEP	Predicted GO
MF	GO:0010333	terpene synthase activity	IEP	Predicted GO
CC	GO:0016592	mediator complex	IEP	Predicted GO
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Predicted GO
BP	GO:1901657	glycosyl compound metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	83	139
IPR000571	Znf_CCCH	14	38

External Links

No external refs found!