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GRMZM2G169994


Description : RING membrane-anchor 1


Gene families : OG_42_0000548 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000548_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G169994
Cluster HCCA clusters: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Bradi4g00760 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Brara.I00230.1 No alias E3 ubiquitin ligase *(RMA/MUSE) 0.03 Orthogroups_2024-Update
Glyma.12G112000 No alias RING membrane-anchor 1 0.04 Orthogroups_2024-Update
HORVU6Hr1G060440.5 No alias E3 ubiquitin ligase *(RMA/MUSE) 0.03 Orthogroups_2024-Update
LOC_Os04g44820 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
Seita.7G177900.1 No alias E3 ubiquitin ligase *(RMA/MUSE) 0.03 Orthogroups_2024-Update
Sobic.004G228100.2 No alias E3 ubiquitin ligase *(RMA/MUSE) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP Predicted GO
MF GO:0005534 galactose binding IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0018298 protein-chromophore linkage IEP Predicted GO
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Predicted GO
MF GO:0048029 monosaccharide binding IEP Predicted GO
MF GO:0051011 microtubule minus-end binding IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 44 92
No external refs found!