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  5. GRMZM2G171469

GRMZM2G171469


Description : tobamovirus multiplication protein 3


Gene families : OG_42_0000984 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000984_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Zea release: GRMZM2G171469
Cluster HCCA clusters: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Bradi1g59650 No alias tobamovirus multiplication 1 0.06 Orthogroups_2024-Update
Bradi3g32150 No alias tobamovirus multiplication protein 3 0.03 Orthogroups_2024-Update
Brara.A01205.1 No alias tobamovirus multiplication replication host factor *(TOM1) 0.04 Orthogroups_2024-Update
Brara.B03092.1 No alias tobamovirus multiplication replication host factor *(TOM1) 0.03 Orthogroups_2024-Update
Kfl00854_0040 kfl00854_0040_v1.... (at2g02180 : 294.0) Necessary for the efficient... 0.02 Orthogroups_2024-Update
Seita.9G341800.1 No alias tobamovirus multiplication replication host factor *(TOM1) 0.05 Orthogroups_2024-Update
Sopen04g003700 No alias Protein of unknown function (DUF1084) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0007029 endoplasmic reticulum organization IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR009457 DUF1084 13 283
No external refs found!