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  5. GRMZM2G172506

GRMZM2G172506


Description : Phototropic-responsive NPH3 family protein


Gene families : OG_42_0000067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G172506
Cluster HCCA clusters: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
A4A49_03215 No alias btbpoz domain-containing protein 0.03 Orthogroups_2024-Update
A4A49_05671 No alias btbpoz domain-containing protein 0.03 Orthogroups_2024-Update
At2g23050 No alias BTB/POZ domain-containing protein NPY4... 0.02 Orthogroups_2024-Update
At3g08660 No alias Putative BTB/POZ domain-containing protein At3g08660... 0.02 Orthogroups_2024-Update
Brara.G01164.1 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.03 Orthogroups_2024-Update
Glyma.13G368300 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Glyma.18G154700 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
HORVU5Hr1G018480.8 No alias substrate adaptor *(NPY) of CUL3-BTB E3 ubiquitin ligase complex 0.02 Orthogroups_2024-Update
LOC_Os03g55830 No alias BTBN10 - Bric-a-Brac, Tramtrack, Broad Complex BTB... 0.02 Orthogroups_2024-Update
PSME_00049816-RA No alias (at1g67900 : 654.0) Phototropic-responsive NPH3 family... 0.02 Orthogroups_2024-Update
Potri.007G112600 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Seita.1G203400.1 No alias substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin ligase complex 0.04 Orthogroups_2024-Update
Seita.9G099400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.010G066100.1 No alias substrate adaptor *(NPY) of CUL3-BTB E3 ubiquitin ligase complex 0.01 Orthogroups_2024-Update
Sopen02g037130 No alias NPH3 family 0.02 Orthogroups_2024-Update
Sopen05g008470 No alias NPH3 family 0.04 Orthogroups_2024-Update
Sopen05g030030 No alias NPH3 family 0.03 Orthogroups_2024-Update
Sopen06g002790 No alias NPH3 family 0.02 Orthogroups_2024-Update
Sopen08g002830 No alias NPH3 family 0.02 Orthogroups_2024-Update
Sopen10g020860 No alias NPH3 family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000124 SAGA complex IEP Predicted GO
MF GO:0003713 transcription coactivator activity IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
CC GO:0005795 Golgi stack IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
MF GO:0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0009891 positive regulation of biosynthetic process IEP Predicted GO
BP GO:0009893 positive regulation of metabolic process IEP Predicted GO
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010628 positive regulation of gene expression IEP Predicted GO
BP GO:0031325 positive regulation of cellular metabolic process IEP Predicted GO
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predicted GO
CC GO:0031984 organelle subcompartment IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
BP GO:0051254 positive regulation of RNA metabolic process IEP Predicted GO
CC GO:0098791 Golgi subcompartment IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Predicted GO
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR027356 NPH3_dom 211 359
IPR000210 BTB/POZ_dom 28 117
No external refs found!