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  5. GRMZM2G176358

GRMZM2G176358


Description : Histone superfamily protein


Gene families : OG_42_0000090 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G176358
Cluster HCCA clusters: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
438193 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
A4A49_56508 No alias histone h3.2 0.03 Orthogroups_2024-Update
A4A49_57080 No alias histone h3.2 0.03 Orthogroups_2024-Update
A4A49_61103 No alias histone h3.2 0.03 Orthogroups_2024-Update
At5g10390 No alias Histone H3 [Source:UniProtKB/TrEMBL;Acc:A0A178WG20] 0.02 Orthogroups_2024-Update
Bradi2g27720 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Brara.I01745.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
Cre06.g264650 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g265250 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g267950 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g274000 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g274850 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g276600 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g276850 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Cre12.g504650 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre12.g504800 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre12.g506300 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre12.g506500 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre16.g661450 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g708150 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Cre17.g708700 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre17.g709050 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.05G188600 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.05G188700 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.07G202500 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.08G227400 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.08G245000 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G130900 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.12G055200 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.13G173100 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.15G032300 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.15G222200 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.18G266200 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G079560.3 No alias histone *(H3) 0.03 Orthogroups_2024-Update
HORVU2Hr1G090210.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
HORVU6Hr1G031580.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
Kfl00240_g18 kfl00240_g18_v1.1 (at5g10980 : 254.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
MA_24261g0010 No alias (at5g10980 : 255.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
MA_350032g0010 No alias (at5g10980 : 266.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00020262-RA No alias (at5g65360 : 228.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
PSME_00049842-RA No alias (at4g40030 : 143.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
Potri.002G028800 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Potri.T159501 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Solyc01g074000 No alias Histone H3 (AHRD V3.3 *** A0A0E0P928_ORYRU) 0.03 Orthogroups_2024-Update
Solyc01g079110 No alias Histone H3 (AHRD V3.3 *** A0A0V0H170_SOLCH) 0.03 Orthogroups_2024-Update
Solyc01g080600 No alias Histone H3 (AHRD V3.3 *** A0A068VC55_COFCA) 0.03 Orthogroups_2024-Update
Sopen01g030620 No alias Core histone H2A/H2B/H3/H4 0.05 Orthogroups_2024-Update
Sopen01g030790 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen01g032420 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen01g033540 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen01g033560 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen01g033790 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen01g033830 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen02g022390 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen10g004700 No alias Core histone H2A/H2B/H3/H4 0.04 Orthogroups_2024-Update
Sopen12g029140 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
CC GO:0070449 elongin complex IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!