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  5. GRMZM2G318408

GRMZM2G318408


Description : brassinosteroid-responsive RING-H2


Gene families : OG_42_0000206 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000206_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G318408
Cluster HCCA clusters: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
At4g11360 No alias E3 ubiquitin-protein ligase RHA1B... 0.03 Orthogroups_2024-Update
GRMZM2G134023 No alias brassinosteroid-responsive RING-H2 0.03 Orthogroups_2024-Update
Glyma.04G153400 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.11G243400 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G009100 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G036510.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G067200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os08g38460 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g30310 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_8362328g0010 No alias (at2g04240 : 118.0) Encodes a small protein with an... 0.03 Orthogroups_2024-Update
PSME_00056848-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Potri.002G161900 No alias brassinosteroid-responsive RING-H2 0.04 Orthogroups_2024-Update
Potri.005G081200 No alias RING-H2 finger A2A 0.03 Orthogroups_2024-Update
Seita.6G056400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G046400.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 112 156
No external refs found!