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Description : proton gradient regulation 3
Gene families : OG_42_0008246 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008246_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea release: GRMZM2G372632 | |
| Cluster | HCCA clusters: Cluster_11 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os10g28600 | No alias | PPR repeat domain containing protein, putative, expressed | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000124 | SAGA complex | IEP | Predicted GO |
| MF | GO:0003713 | transcription coactivator activity | IEP | Predicted GO |
| BP | GO:0006405 | RNA export from nucleus | IEP | Predicted GO |
| BP | GO:0006406 | mRNA export from nucleus | IEP | Predicted GO |
| BP | GO:0009891 | positive regulation of biosynthetic process | IEP | Predicted GO |
| BP | GO:0009893 | positive regulation of metabolic process | IEP | Predicted GO |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0010628 | positive regulation of gene expression | IEP | Predicted GO |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | Predicted GO |
| BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | Predicted GO |
| BP | GO:0045893 | positive regulation of transcription, DNA-templated | IEP | Predicted GO |
| BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0050657 | nucleic acid transport | IEP | Predicted GO |
| BP | GO:0050658 | RNA transport | IEP | Predicted GO |
| BP | GO:0051028 | mRNA transport | IEP | Predicted GO |
| BP | GO:0051168 | nuclear export | IEP | Predicted GO |
| BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0051236 | establishment of RNA localization | IEP | Predicted GO |
| BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | Predicted GO |
| BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | Predicted GO |
| BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | Predicted GO |
| CC | GO:1905368 | peptidase complex | IEP | Predicted GO |
| CC | GO:1990234 | transferase complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 737 | 762 |
| IPR002885 | Pentatricopeptide_repeat | 422 | 447 |
| IPR002885 | Pentatricopeptide_repeat | 345 | 393 |
| IPR002885 | Pentatricopeptide_repeat | 449 | 497 |
| IPR002885 | Pentatricopeptide_repeat | 1044 | 1084 |
| IPR002885 | Pentatricopeptide_repeat | 837 | 883 |
| IPR002885 | Pentatricopeptide_repeat | 589 | 637 |
| IPR002885 | Pentatricopeptide_repeat | 908 | 953 |
| IPR002885 | Pentatricopeptide_repeat | 767 | 811 |
| IPR002885 | Pentatricopeptide_repeat | 974 | 1018 |
| IPR002885 | Pentatricopeptide_repeat | 519 | 567 |
| IPR033443 | PPR_long | 189 | 332 |
| No external refs found! |