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  5. GRMZM2G378907

GRMZM2G378907


Description : tubby like protein 3


Gene families : OG_42_0000271 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G378907
Cluster HCCA clusters: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
A4A49_26634 No alias tubby-like f-box protein 5 0.03 Orthogroups_2024-Update
At1g25280 No alias Tubby-like F-box protein 10... 0.03 Orthogroups_2024-Update
Bradi4g41820 No alias tubby like protein 1 0.03 Orthogroups_2024-Update
Glyma.10G224900 No alias tubby like protein 10 0.04 Orthogroups_2024-Update
Glyma.11G069400 No alias tubby like protein 2 0.02 Orthogroups_2024-Update
Glyma.20G166900 No alias tubby like protein 1 0.03 Orthogroups_2024-Update
Mp3g02190.1 No alias transcription factor (TUB) 0.02 Orthogroups_2024-Update
Potri.001G390200 No alias tubby like protein 7 0.02 Orthogroups_2024-Update
Pp1s222_14V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.3G148500.1 No alias TUB-type transcription factor 0.03 Orthogroups_2024-Update
Seita.7G293600.1 No alias TUB-type transcription factor 0.03 Orthogroups_2024-Update
Seita.9G404200.1 No alias TUB-type transcription factor 0.04 Orthogroups_2024-Update
Sopen04g027400 No alias Tub family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000007 Tubby_C 285 436
IPR000007 Tubby_C 113 247
No external refs found!