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  5. GRMZM2G469162

GRMZM2G469162


Description : INO80 ortholog


Gene families : OG_42_0006128 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006128_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G469162
Cluster HCCA clusters: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Bradi1g62320 No alias INO80 ortholog 0.04 Orthogroups_2024-Update
Glyma.03G133700 No alias INO80 ortholog 0.05 Orthogroups_2024-Update
HORVU4Hr1G046140.4 No alias ATPase component *(Ino80) of chromatin remodelling complex 0.03 Orthogroups_2024-Update
LOC_Os03g22900 No alias SNF2 family N-terminal domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_3312g0010 No alias (at3g57300 : 1489.0) Encodes the Arabidopsis INO80... 0.04 Orthogroups_2024-Update
Mp8g00130.1 No alias ATPase component Ino80 of chromatin remodelling complex 0.02 Orthogroups_2024-Update
Seita.9G402800.1 No alias ATPase component *(Ino80) of chromatin remodelling complex 0.03 Orthogroups_2024-Update
Sobic.001G370900.2 No alias ATPase component *(Ino80) of chromatin remodelling complex 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
CC GO:0005685 U1 snRNP IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006376 mRNA splice site selection IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
MF GO:0031369 translation initiation factor binding IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
InterPro domains Description Start Stop
IPR020838 DBINO 339 467
IPR001650 Helicase_C 1184 1294
IPR000330 SNF2_N 579 865
No external refs found!