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  5. GRMZM2G476685

GRMZM2G476685


Description : CYCLIN D1;1


Gene families : OG_42_0000136 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G476685
Cluster HCCA clusters: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
A4A49_04871 No alias cyclin-d3-2 0.02 Orthogroups_2024-Update
Bradi1g21230 No alias CYCLIN D4;1 0.03 Orthogroups_2024-Update
Cre09.g414416 No alias Cyclin family protein 0.02 Orthogroups_2024-Update
Glyma.02G212400 No alias Cyclin D2;1 0.04 Orthogroups_2024-Update
HORVU4Hr1G013700.8 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_172842g0010 No alias (at3g50070 : 166.0) Encode CYCD3;3, a CYCD3 D-type... 0.03 Orthogroups_2024-Update
MA_93221g0010 No alias (at1g70210 : 231.0) Encodes a D-type cyclin that... 0.04 Orthogroups_2024-Update
PSME_00003592-RA No alias (at4g34160 : 230.0) encodes a cyclin D-type protein... 0.03 Orthogroups_2024-Update
Seita.4G104200.1 No alias regulatory protein *(CYCD) of cell cycle 0.03 Orthogroups_2024-Update
Seita.6G185800.1 No alias regulatory protein *(CYCD) of cell cycle 0.03 Orthogroups_2024-Update
Sobic.001G166800.1 No alias regulatory protein *(CYCD) of cell cycle 0.02 Orthogroups_2024-Update
Sopen01g010480 No alias Cyclin, N-terminal domain 0.03 Orthogroups_2024-Update
evm.model.contig_2077.9 No alias (at1g80370 : 173.0) Cyclin A2;4 (CYCA2;4); CONTAINS... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP Predicted GO
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
MF GO:0004594 pantothenate kinase activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
BP GO:0006091 generation of precursor metabolites and energy IEP Predicted GO
BP GO:0007033 vacuole organization IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
BP GO:0015937 coenzyme A biosynthetic process IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Predicted GO
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Predicted GO
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:1905037 autophagosome organization IEP Predicted GO
InterPro domains Description Start Stop
IPR006671 Cyclin_N 50 177
IPR004367 Cyclin_C-dom 180 280
No external refs found!