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  5. At1g63780

At1g63780


Description : IMP4 [Source:UniProtKB/TrEMBL;Acc:A0A178WDJ3]


Gene families : OG_42_0005915 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005915_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g63780
Cluster HCCA clusters: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Brara.I01380.1 No alias SSU processome assembly factor *(IMP4) 0.03 Orthogroups_2024-Update
Cre10.g454100 No alias Ribosomal RNA processing Brix domain protein 0.02 Orthogroups_2024-Update
Mp2g04740.1 No alias SSU processome assembly factor (IMP4) 0.02 Orthogroups_2024-Update
Seita.6G058500.1 No alias SSU processome assembly factor *(IMP4) 0.04 Orthogroups_2024-Update
Sopen01g003240 No alias Brix domain 0.03 Orthogroups_2024-Update
evm.model.tig00020848.22 No alias (at1g63780 : 310.0) Small nucleolar ribonucleoprotein... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006547 histidine metabolic process IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019238 cyclohydrolase activity IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
BP GO:0052803 imidazole-containing compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007109 Brix 90 261
No external refs found!