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GRMZM2G567897


Description : zinc finger (C3HC4-type RING finger) family protein


Gene families : OG_42_0001974 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001974_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM2G567897
Cluster HCCA clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Bradi2g39220 No alias zinc finger (C3HC4-type RING finger) family protein 0.02 Orthogroups_2024-Update
Glyma.07G134600 No alias RING-H2 finger C2A 0.03 Orthogroups_2024-Update
Glyma.18G037000 No alias RING-H2 finger C2A 0.03 Orthogroups_2024-Update
LOC_Os01g74040 No alias zinc finger, RING-type, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g01940 No alias zinc finger, RING-type, putative, expressed 0.05 Orthogroups_2024-Update
Potri.010G201300 No alias RING-H2 finger C2A 0.03 Orthogroups_2024-Update
Sobic.001G422900.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Sobic.009G010400.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004819 glutamine-tRNA ligase activity IEP Predicted GO
BP GO:0006425 glutaminyl-tRNA aminoacylation IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR010543 DUF1117 227 332
IPR001841 Znf_RING 167 209
IPR039525 RNF126-like_zinc-ribbon 18 50
No external refs found!