1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. At1g65680

At1g65680


Description : Putative expansin-B2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHY6]


Gene families : OG_42_0000145 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g65680
Cluster HCCA clusters: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
A4A49_20975 No alias putative expansin-b2 0.03 Orthogroups_2024-Update
A4A49_24520 No alias expansin-b15 0.02 Orthogroups_2024-Update
A4A49_57799 No alias putative expansin-b2 0.03 Orthogroups_2024-Update
GRMZM2G059785 No alias expansin B2 0.03 Orthogroups_2024-Update
GRMZM2G121308 No alias expansin B4 0.03 Orthogroups_2024-Update
Glyma.11G166546 No alias expansin B2 0.03 Orthogroups_2024-Update
HORVU6Hr1G060410.2 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os02g44106 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00003968-RA No alias (q7x6j9|exb17_orysa : 259.0) Expansin-B17 precursor... 0.03 Orthogroups_2024-Update
PSME_00008080-RA No alias (q7x6j9|exb17_orysa : 305.0) Expansin-B17 precursor... 0.04 Orthogroups_2024-Update
PSME_00009595-RA No alias (q7x6j9|exb17_orysa : 96.7) Expansin-B17 precursor... 0.04 Orthogroups_2024-Update
PSME_00024925-RA No alias (q7x6j9|exb17_orysa : 300.0) Expansin-B17 precursor... 0.03 Orthogroups_2024-Update
PSME_00038846-RA No alias (at2g20750 : 157.0) member of BETA-EXPANSINS. Naming... 0.03 Orthogroups_2024-Update
PSME_00039752-RA No alias (q7x6j9|exb17_orysa : 251.0) Expansin-B17 precursor... 0.02 Orthogroups_2024-Update
Potri.014G066300 No alias expansin B2 0.04 Orthogroups_2024-Update
Pp1s147_37V6 No alias beta-expansin 3 0.03 Orthogroups_2024-Update
Pp1s251_59V6 No alias beta-expansin 3 0.04 Orthogroups_2024-Update
Pp1s313_58V6 No alias beta-expansin 3 0.02 Orthogroups_2024-Update
Pp1s313_59V6 No alias beta-expansin 3 0.02 Orthogroups_2024-Update
Seita.7G190800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G157100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G300700.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G300800.2 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G301600.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002376 immune system process IEP Predicted GO
BP GO:0002682 regulation of immune system process IEP Predicted GO
BP GO:0002831 regulation of response to biotic stimulus IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0006955 immune response IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
BP GO:0010112 regulation of systemic acquired resistance IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
BP GO:0031347 regulation of defense response IEP Predicted GO
BP GO:0032101 regulation of response to external stimulus IEP Predicted GO
BP GO:0043900 regulation of multi-organism process IEP Predicted GO
BP GO:0045087 innate immune response IEP Predicted GO
BP GO:0045088 regulation of innate immune response IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0050776 regulation of immune response IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 84 148
IPR007117 Expansin_CBD 175 258
No external refs found!