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  5. GRMZM5G804064

GRMZM5G804064


Description : DEA(D/H)-box RNA helicase family protein


Gene families : OG_42_0007352 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007352_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM5G804064
Cluster HCCA clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Bradi4g07397 No alias DEA(D/H)-box RNA helicase family protein 0.03 Orthogroups_2024-Update
Brara.H00871.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Kfl00083_0290 kfl00083_0290_v1.1 (at4g16630 : 610.0) DEA(D/H)-box RNA helicase family... 0.03 Orthogroups_2024-Update
Pp1s29_19V6 No alias FCAALL.424; DEAD/DEAH box helicase, putative (RH28)... 0.02 Orthogroups_2024-Update
Seita.3G322400.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sopen04g035190 No alias DEAD/DEAH box helicase 0.04 Orthogroups_2024-Update
evm.model.tig00000792.35 No alias (at4g16630 : 441.0) DEA(D/H)-box RNA helicase family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004814 arginine-tRNA ligase activity IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
BP GO:0006302 double-strand break repair IEP Predicted GO
BP GO:0006420 arginyl-tRNA aminoacylation IEP Predicted GO
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Predicted GO
MF GO:0017056 structural constituent of nuclear pore IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
MF GO:0051743 red chlorophyll catabolite reductase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001650 Helicase_C 398 502
IPR011545 DEAD/DEAH_box_helicase_dom 186 355
No external refs found!