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  5. GRMZM5G817625

GRMZM5G817625


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_42_0001613 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001613_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Zea release: GRMZM5G817625
Cluster HCCA clusters: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
A4A49_26826 No alias katanin p80 wd40 repeat-containing subunit b1-like protein 0.04 Orthogroups_2024-Update
LOC_Os04g58130 No alias katanin p80 WD40 repeat-containing subunit B1 homolog 1,... 0.02 Orthogroups_2024-Update
Seita.5G340100.1 No alias regulatory component *(KTN80) of Katanin ATP-dependent... 0.05 Orthogroups_2024-Update
Sopen02g023620 No alias WD domain, G-beta repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR028021 Katanin_C-terminal 108 265
No external refs found!