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Description : Pentatricopeptide repeat (PPR) superfamily protein
Gene families : OG_42_0022636 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Zea release: GRMZM5G821637 | |
| Cluster | HCCA clusters: Cluster_88 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004843 | thiol-dependent ubiquitin-specific protease activity | IEP | Predicted GO |
| BP | GO:0006284 | base-excision repair | IEP | Predicted GO |
| BP | GO:0006766 | vitamin metabolic process | IEP | Predicted GO |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Predicted GO |
| BP | GO:0006771 | riboflavin metabolic process | IEP | Predicted GO |
| MF | GO:0008703 | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity | IEP | Predicted GO |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Predicted GO |
| BP | GO:0009231 | riboflavin biosynthetic process | IEP | Predicted GO |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Predicted GO |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Predicted GO |
| BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Predicted GO |
| MF | GO:1990380 | Lys48-specific deubiquitinase activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 179 | 206 |
| IPR002885 | Pentatricopeptide_repeat | 539 | 564 |
| IPR002885 | Pentatricopeptide_repeat | 339 | 366 |
| IPR002885 | Pentatricopeptide_repeat | 274 | 300 |
| IPR002885 | Pentatricopeptide_repeat | 369 | 395 |
| IPR002885 | Pentatricopeptide_repeat | 307 | 334 |
| IPR002885 | Pentatricopeptide_repeat | 243 | 272 |
| IPR002885 | Pentatricopeptide_repeat | 467 | 496 |
| IPR002885 | Pentatricopeptide_repeat | 212 | 242 |
| No external refs found! |