GRMZM5G839592

Description : sorting nexin 1

Gene families : OG_42_0004304 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004304_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM5G839592
Cluster	HCCA clusters: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method	Actions
Kfl00109_0220	kfl00109_0220_v1.1	(at5g06140 : 356.0) Homolog of yeast retromer subunit...	0.04	Orthogroups_2024-Update
LOC_Os01g64280	No alias	sorting nexin 1, putative, expressed	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005543	phospholipid binding	None	Extended
MF	GO:0008289	lipid binding	None	Extended
MF	GO:0035091	phosphatidylinositol binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006952	defense response	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001683	Phox	20	134
IPR015404	Vps5_C	166	390

External Links

No external refs found!