GRMZM5G858887

Description : Cyclic nucleotide-regulated ion channel family protein

Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Zea release: GRMZM5G858887
Cluster	HCCA clusters: Cluster_61

Target	Alias	Description	ECC score	Gene Family Method
A4A49_08512	No alias	putative cyclic nucleotide-gated ion channel 20, chloroplastic	0.01	Orthogroups_2024-Update
A4A49_18102	No alias	cyclic nucleotide-gated ion channel 1	0.02	Orthogroups_2024-Update
A4A49_30061	No alias	putative cyclic nucleotide-gated ion channel 14	0.03	Orthogroups_2024-Update
At2g46450	No alias	Probable cyclic nucleotide-gated ion channel 12...	0.03	Orthogroups_2024-Update
Bradi3g49290	No alias	cyclic nucleotide-gated channel 15	0.02	Orthogroups_2024-Update
Brara.B01426.1	No alias	cyclic nucleotide-gated cation channel *(CNGC)	0.03	Orthogroups_2024-Update
Glyma.06G184000	No alias	cyclic nucleotide-gated channel 16	0.04	Orthogroups_2024-Update
LOC_Os03g55100	No alias	cyclic nucleotide-gated ion channel 2, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os06g33600	No alias	cyclic nucleotide-gated ion channel 1, putative, expressed	0.02	Orthogroups_2024-Update
MA_167620g0010	No alias	(at5g15410 : 804.0) 'defense, no death' gene (DND1)...	0.03	Orthogroups_2024-Update
Potri.012G038700	No alias	cyclic nucleotide-binding transporter 1	0.02	Orthogroups_2024-Update
Seita.1G336400.1	No alias	cyclic nucleotide-gated cation channel *(CNGC)	0.03	Orthogroups_2024-Update
Sobic.004G113300.1	No alias	cyclic nucleotide-gated cation channel *(CNGC)	0.03	Orthogroups_2024-Update
Sobic.004G221000.2	No alias	cyclic nucleotide-gated cation channel *(CNGC)	0.02	Orthogroups_2024-Update
Sobic.006G237400.1	No alias	cyclic nucleotide-gated cation channel *(CNGC)	0.02	Orthogroups_2024-Update
Solyc09g007840	No alias	Cyclic nucleotide-gated channel (AHRD V3.3 *** A0A0K9PRG4_ZOSMR)	0.02	Orthogroups_2024-Update
Sopen05g028790	No alias	Ion transport protein	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions

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Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	Predicted GO
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	Predicted GO
BP	GO:0001932	regulation of protein phosphorylation	IEP	Predicted GO
BP	GO:0009314	response to radiation	IEP	Predicted GO
BP	GO:0009416	response to light stimulus	IEP	Predicted GO
BP	GO:0009581	detection of external stimulus	IEP	Predicted GO
BP	GO:0009582	detection of abiotic stimulus	IEP	Predicted GO
BP	GO:0009583	detection of light stimulus	IEP	Predicted GO
BP	GO:0009584	detection of visible light	IEP	Predicted GO
BP	GO:0009605	response to external stimulus	IEP	Predicted GO
BP	GO:0009628	response to abiotic stimulus	IEP	Predicted GO
BP	GO:0018298	protein-chromophore linkage	IEP	Predicted GO
MF	GO:0019900	kinase binding	IEP	Predicted GO
MF	GO:0019901	protein kinase binding	IEP	Predicted GO
BP	GO:0042325	regulation of phosphorylation	IEP	Predicted GO
BP	GO:0043549	regulation of kinase activity	IEP	Predicted GO
BP	GO:0045859	regulation of protein kinase activity	IEP	Predicted GO
BP	GO:0051338	regulation of transferase activity	IEP	Predicted GO
BP	GO:0051606	detection of stimulus	IEP	Predicted GO
BP	GO:0071900	regulation of protein serine/threonine kinase activity	IEP	Predicted GO
MF	GO:1901567	fatty acid derivative binding	IEP	Predicted GO
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR005821	Ion_trans_dom	144	470
IPR000595	cNMP-bd_dom	572	660

External Links

No external refs found!

GRMZM5G858887

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation