Brara.A00119.1

Description : EC_4.4 carbon-sulfur lyase & 1-aminocyclopropane-1-carboxylate (ACC) synthase

Gene families : OG_42_0000419 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000419_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.A00119.1
Cluster	HCAA Clusters: Cluster_182

Target	Alias	Description	ECC score	Gene Family Method
A4A49_57945	No alias	1-aminocyclopropane-1-carboxylate synthase	0.03	Orthogroups_2024-Update
Glyma.05G108900	No alias	1-amino-cyclopropane-1-carboxylate synthase 8	0.03	Orthogroups_2024-Update
Glyma.06G049900	No alias	1-amino-cyclopropane-1-carboxylate synthase 8	0.04	Orthogroups_2024-Update
Glyma.16G032200	No alias	ACC synthase 1	0.04	Orthogroups_2024-Update
HORVU2Hr1G094230.2	No alias	EC_4.4 carbon-sulfur lyase	0.02	Orthogroups_2024-Update
HORVU4Hr1G009800.1	No alias	EC_4.4 carbon-sulfur lyase &...	0.03	Orthogroups_2024-Update
MA_10375359g0010	No alias	(at4g26200 : 342.0) Member of a family of proteins in...	0.03	Orthogroups_2024-Update
MA_121240g0010	No alias	(at4g26200 : 551.0) Member of a family of proteins in...	0.04	Orthogroups_2024-Update
MA_17005g0010	No alias	(q00257\|1a12_cucma : 566.0)...	0.03	Orthogroups_2024-Update
PSME_00021490-RA	No alias	(at4g26200 : 563.0) Member of a family of proteins in...	0.03	Orthogroups_2024-Update
Potri.001G099400	No alias	1-aminocyclopropane-1-carboxylic acid (acc) synthase 6	0.03	Orthogroups_2024-Update
Potri.003G117700	No alias	ACC synthase 10	0.03	Orthogroups_2024-Update
Seita.7G208700.1	No alias	EC_4.4 carbon-sulfur lyase &...	0.04	Orthogroups_2024-Update
Seita.9G109200.1	No alias	EC_4.4 carbon-sulfur lyase &...	0.03	Orthogroups_2024-Update
Sobic.006G187900.1	No alias	EC_4.4 carbon-sulfur lyase &...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	IEA	16Dec
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030170	pyridoxal phosphate binding	IEA	16Dec
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050662	coenzyme binding	None	Extended
MF	GO:0070279	vitamin B6 binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003746	translation elongation factor activity	IEP	Predicted GO
BP	GO:0006414	translational elongation	IEP	Predicted GO
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Predicted GO
CC	GO:0009522	photosystem I	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO
MF	GO:0061630	ubiquitin protein ligase activity	IEP	Predicted GO
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR004839	Aminotransferase_I/II	41	424

External Links

No external refs found!