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  5. Brara.A00146.1

Brara.A00146.1


Description : indole-3-acetic acid-amido synthetase *(GH3)


Gene families : OG_42_0000128 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A00146.1
Cluster HCAA Clusters: Cluster_267

Target Alias Description ECC score Gene Family Method Actions
234778 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
A4A49_27230 No alias indole-3-acetic acid-amido synthetase gh3.6 0.03 Orthogroups_2024-Update
A4A49_36801 No alias indole-3-acetic acid-amido synthetase gh3.6 0.04 Orthogroups_2024-Update
At1g28130 No alias GH3.17 [Source:UniProtKB/TrEMBL;Acc:A0A178WH43] 0.03 Orthogroups_2024-Update
At5g13350 No alias Auxin-responsive GH3 family protein... 0.03 Orthogroups_2024-Update
At5g51470 No alias Auxin-responsive GH3 family protein... 0.03 Orthogroups_2024-Update
Bradi2g14830 No alias Auxin-responsive GH3 family protein 0.04 Orthogroups_2024-Update
Brara.C02329.1 No alias jasmonoyl-amino acid synthetase *(JAR1) 0.05 Orthogroups_2024-Update
Brara.K00097.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.05 Orthogroups_2024-Update
Glyma.06G260800 No alias Auxin-responsive GH3 family protein 0.03 Orthogroups_2024-Update
LOC_Os11g32510 No alias OsGH3-13 - Auxin-responsive GH3 gene family member, expressed 0.03 Orthogroups_2024-Update
Potri.002G206400 No alias putative indole-3-acetic acid-amido synthetase GH3.9 0.04 Orthogroups_2024-Update
Potri.013G151100 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
Seita.2G426000.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.03 Orthogroups_2024-Update
Sobic.001G331200.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.02 Orthogroups_2024-Update
Solyc02g092820 No alias IAA-amido synthetase 3-4 0.07 Orthogroups_2024-Update
Sopen10g005450 No alias GH3 auxin-responsive promoter 0.02 Orthogroups_2024-Update
Sopen12g001290 No alias GH3 auxin-responsive promoter 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008531 riboflavin kinase activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004993 GH3 23 557
No external refs found!