Brara.A00229.1

Description : regulatory protein *(SBA) of mitochondrial nucleoid organization

Gene families : OG_42_0001970 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001970_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.A00229.1
Cluster	HCAA Clusters: Cluster_264

Target	Alias	Description	ECC score	Gene Family Method
At3g03060	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.06	Orthogroups_2024-Update
At4g36580	No alias	AAA-type ATPase family protein...	0.03	Orthogroups_2024-Update
At5g16930	No alias	AAA-type ATPase family protein...	0.05	Orthogroups_2024-Update
Bradi3g52367	No alias	AAA-type ATPase family protein	0.02	Orthogroups_2024-Update
GRMZM2G067242	No alias	AAA-type ATPase family protein	0.04	Orthogroups_2024-Update
GRMZM2G069422	No alias	AAA-type ATPase family protein	0.04	Orthogroups_2024-Update
Glyma.11G069000	No alias	AAA-type ATPase family protein	0.04	Orthogroups_2024-Update
Glyma.11G091700	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.07	Orthogroups_2024-Update
Glyma.12G017700	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.04	Orthogroups_2024-Update
HORVU0Hr1G016640.4	No alias	regulatory protein *(SBA) of mitochondrial nucleoid organization	0.02	Orthogroups_2024-Update
HORVU0Hr1G032110.1	No alias	regulatory protein *(SBA) of mitochondrial nucleoid organization	0.02	Orthogroups_2024-Update
LOC_Os02g47760	No alias	AAA-type ATPase family protein, putative, expressed	0.02	Orthogroups_2024-Update
Potri.007G023900	No alias	AAA-type ATPase family protein	0.03	Orthogroups_2024-Update
Seita.1G283400.1	No alias	regulatory protein *(SBA) of mitochondrial nucleoid organization	0.05	Orthogroups_2024-Update
Seita.1G290000.1	No alias	regulatory protein *(SBA) of mitochondrial nucleoid organization	0.04	Orthogroups_2024-Update
Sobic.004G266900.1	No alias	regulatory protein *(SBA) of mitochondrial nucleoid organization	0.04	Orthogroups_2024-Update
Sobic.004G272400.1	No alias	regulatory protein *(SBA) of mitochondrial nucleoid organization	0.03	Orthogroups_2024-Update
Solyc02g062700	No alias	AAA-type ATPase family protein (AHRD V3.3 *** AT2G18330.1)	0.05	Orthogroups_2024-Update
Solyc03g097020	No alias	AAA-type ATPase family protein	0.06	Orthogroups_2024-Update
Sopen02g013720	No alias	Domain of unknown function (DUF3523)	0.06	Orthogroups_2024-Update
Sopen03g027770	No alias	Domain of unknown function (DUF3523)	0.06	Orthogroups_2024-Update
evm.model.contig_3464.1	No alias	(at3g03060 : 297.0) P-loop containing nucleoside...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	16Dec
MF	GO:0008144	drug binding	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	16Dec
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000178	exosome (RNase complex)	IEP	Predicted GO
MF	GO:0000287	magnesium ion binding	IEP	Predicted GO
MF	GO:0000774	adenyl-nucleotide exchange factor activity	IEP	Predicted GO
MF	GO:0001882	nucleoside binding	IEP	Predicted GO
MF	GO:0001883	purine nucleoside binding	IEP	Predicted GO
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0003724	RNA helicase activity	IEP	Predicted GO
MF	GO:0004386	helicase activity	IEP	Predicted GO
MF	GO:0004743	pyruvate kinase activity	IEP	Predicted GO
MF	GO:0004826	phenylalanine-tRNA ligase activity	IEP	Predicted GO
MF	GO:0005525	GTP binding	IEP	Predicted GO
CC	GO:0005783	endoplasmic reticulum	IEP	Predicted GO
BP	GO:0006364	rRNA processing	IEP	Predicted GO
BP	GO:0006432	phenylalanyl-tRNA aminoacylation	IEP	Predicted GO
BP	GO:0006457	protein folding	IEP	Predicted GO
BP	GO:0016072	rRNA metabolic process	IEP	Predicted GO
MF	GO:0019001	guanyl nucleotide binding	IEP	Predicted GO
MF	GO:0030955	potassium ion binding	IEP	Predicted GO
MF	GO:0031420	alkali metal ion binding	IEP	Predicted GO
MF	GO:0032549	ribonucleoside binding	IEP	Predicted GO
MF	GO:0032550	purine ribonucleoside binding	IEP	Predicted GO
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Predicted GO
BP	GO:0034470	ncRNA processing	IEP	Predicted GO
BP	GO:0034660	ncRNA metabolic process	IEP	Predicted GO
MF	GO:0042802	identical protein binding	IEP	Predicted GO
MF	GO:0042803	protein homodimerization activity	IEP	Predicted GO
MF	GO:0051087	chaperone binding	IEP	Predicted GO
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Predicted GO
MF	GO:0060590	ATPase regulator activity	IEP	Predicted GO
CC	GO:1905354	exoribonuclease complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	354	481
IPR021911	DUF3523	21	286

External Links

No external refs found!

Brara.A00229.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation