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Description : RAB5 canonical effector *(EREX)
Gene families : OG_42_0003985 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003985_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.A00572.1 | |
| Cluster | HCAA Clusters: Cluster_139 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GRMZM2G131070 | No alias | Phox (PX) domain-containing protein | 0.02 | Orthogroups_2024-Update | |
| Potri.018G026000 | No alias | Phox (PX) domain-containing protein | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G368901.1 | No alias | RAB5 canonical effector *(EREX) | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0035091 | phosphatidylinositol binding | IEA | 16Dec |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003729 | mRNA binding | IEP | Predicted GO |
| MF | GO:0004860 | protein kinase inhibitor activity | IEP | Predicted GO |
| MF | GO:0004861 | cyclin-dependent protein serine/threonine kinase inhibitor activity | IEP | Predicted GO |
| CC | GO:0005685 | U1 snRNP | IEP | Predicted GO |
| BP | GO:0006325 | chromatin organization | IEP | Predicted GO |
| BP | GO:0006376 | mRNA splice site selection | IEP | Predicted GO |
| BP | GO:0006476 | protein deacetylation | IEP | Predicted GO |
| MF | GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity | IEP | Predicted GO |
| MF | GO:0015020 | glucuronosyltransferase activity | IEP | Predicted GO |
| BP | GO:0016043 | cellular component organization | IEP | Predicted GO |
| MF | GO:0016538 | cyclin-dependent protein serine/threonine kinase regulator activity | IEP | Predicted GO |
| BP | GO:0016569 | covalent chromatin modification | IEP | Predicted GO |
| BP | GO:0016570 | histone modification | IEP | Predicted GO |
| BP | GO:0016571 | histone methylation | IEP | Predicted GO |
| BP | GO:0016575 | histone deacetylation | IEP | Predicted GO |
| CC | GO:0016592 | mediator complex | IEP | Predicted GO |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | Predicted GO |
| MF | GO:0019210 | kinase inhibitor activity | IEP | Predicted GO |
| BP | GO:0022607 | cellular component assembly | IEP | Predicted GO |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Predicted GO |
| MF | GO:0030291 | protein serine/threonine kinase inhibitor activity | IEP | Predicted GO |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Predicted GO |
| MF | GO:0031072 | heat shock protein binding | IEP | Predicted GO |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Predicted GO |
| BP | GO:0034968 | histone lysine methylation | IEP | Predicted GO |
| BP | GO:0035601 | protein deacylation | IEP | Predicted GO |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Predicted GO |
| CC | GO:0044428 | nuclear part | IEP | Predicted GO |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Predicted GO |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Predicted GO |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Predicted GO |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | Predicted GO |
| BP | GO:0098732 | macromolecule deacylation | IEP | Predicted GO |
| CC | GO:0120114 | Sm-like protein family complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001683 | Phox | 85 | 158 |
| No external refs found! |