Brara.A00908.1

Description : regulatory protein *(BCM) of chlorophyll homeostasis

Gene families : OG_42_0006323 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006323_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa: Brara.A00908.1
Cluster	HCAA Clusters: Cluster_9

Target	Alias	Description	ECC score	Gene Family Method
At2g35260	No alias	At2g35260/T4C15.7 [Source:UniProtKB/TrEMBL;Acc:O82167]	0.05	Orthogroups_2024-Update
At4g17840	No alias	At4g17840 [Source:UniProtKB/TrEMBL;Acc:Q0WMZ7]	0.05	Orthogroups_2024-Update
Glyma.01G198500	No alias	Function unknown	0.03	Orthogroups_2024-Update
PSME_00005323-RA	No alias	(at2g35260 : 339.0) unknown protein; FUNCTIONS IN:...	0.03	Orthogroups_2024-Update
Pp1s120_106V6	No alias	af361619_1 at2g35260	0.04	Orthogroups_2024-Update
Pp1s69_200V6	No alias	af361619_1 at2g35260	0.03	Orthogroups_2024-Update
Seita.7G166400.1	No alias	regulatory protein *(BCM) of chlorophyll homeostasis	0.04	Orthogroups_2024-Update
Sobic.006G147300.1	No alias	regulatory protein *(BCM) of chlorophyll homeostasis	0.03	Orthogroups_2024-Update
Solyc08g005010	No alias	CAAX protease self-immunity protein (AHRD V3.3 *** AT4G17840.1)	0.04	Orthogroups_2024-Update
Sopen08g001030	No alias	CAAX protease self-immunity	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004222	metalloendopeptidase activity	IEA	16Dec
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008237	metallopeptidase activity	None	Extended
CC	GO:0016020	membrane	IEA	16Dec
BP	GO:0016485	protein processing	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051604	protein maturation	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0071586	CAAX-box protein processing	IEA	16Dec
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005509	calcium ion binding	IEP	Predicted GO
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Predicted GO
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	IEP	Predicted GO
CC	GO:0009507	chloroplast	IEP	Predicted GO
CC	GO:0009521	photosystem	IEP	Predicted GO
CC	GO:0009522	photosystem I	IEP	Predicted GO
CC	GO:0009523	photosystem II	IEP	Predicted GO
CC	GO:0009536	plastid	IEP	Predicted GO
CC	GO:0009538	photosystem I reaction center	IEP	Predicted GO
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Predicted GO
MF	GO:0010309	acireductone dioxygenase [iron(II)-requiring] activity	IEP	Predicted GO
BP	GO:0015979	photosynthesis	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Predicted GO
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Predicted GO
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	Predicted GO
MF	GO:0016726	oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor	IEP	Predicted GO
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEP	Predicted GO
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Predicted GO
MF	GO:0019842	vitamin binding	IEP	Predicted GO
CC	GO:0019898	extrinsic component of membrane	IEP	Predicted GO
MF	GO:0030151	molybdenum ion binding	IEP	Predicted GO
MF	GO:0030170	pyridoxal phosphate binding	IEP	Predicted GO
CC	GO:0032991	protein-containing complex	IEP	Predicted GO
MF	GO:0033743	peptide-methionine (R)-S-oxide reductase activity	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
CC	GO:0044424	intracellular part	IEP	Predicted GO
CC	GO:0044425	membrane part	IEP	Predicted GO
CC	GO:0044436	thylakoid part	IEP	Predicted GO
CC	GO:0044464	cell part	IEP	Predicted GO
BP	GO:0046490	isopentenyl diphosphate metabolic process	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO
BP	GO:0050992	dimethylallyl diphosphate biosynthetic process	IEP	Predicted GO
BP	GO:0050993	dimethylallyl diphosphate metabolic process	IEP	Predicted GO
MF	GO:0051213	dioxygenase activity	IEP	Predicted GO
MF	GO:0051745	4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity	IEP	Predicted GO
MF	GO:0070279	vitamin B6 binding	IEP	Predicted GO
CC	GO:0098796	membrane protein complex	IEP	Predicted GO
CC	GO:1902494	catalytic complex	IEP	Predicted GO
CC	GO:1990204	oxidoreductase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003675	CAAX_protease	219	370

External Links

No external refs found!

Brara.A00908.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation