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  5. Brara.A01293.1

Brara.A01293.1


Description : magnesium dechelatase *(SGR)


Gene families : OG_42_0001920 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001920_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A01293.1
Cluster HCAA Clusters: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
A4A49_43627 No alias protein stay-green like, chloroplastic 0.07 Orthogroups_2024-Update
At1g44000 No alias Protein STAY-GREEN LIKE, chloroplastic... 0.05 Orthogroups_2024-Update
At4g22920 No alias Protein STAY-GREEN 1, chloroplastic... 0.09 Orthogroups_2024-Update
Bradi4g36060 No alias non-yellowing 1 0.03 Orthogroups_2024-Update
Bradi5g27602 No alias Function unknown 0.03 Orthogroups_2024-Update
Brara.H01133.1 No alias magnesium dechelatase *(SGR) 0.03 Orthogroups_2024-Update
Glyma.06G119500 No alias Function unknown 0.04 Orthogroups_2024-Update
Glyma.17G132800 No alias non-yellowing 1 0.04 Orthogroups_2024-Update
HORVU3Hr1G001480.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU5Hr1G081500.1 No alias magnesium dechelatase *(SGR) 0.03 Orthogroups_2024-Update
LOC_Os04g59610 No alias expressed protein 0.07 Orthogroups_2024-Update
Mp1g17090.1 No alias magnesium dechelatase 0.02 Orthogroups_2024-Update
PSME_00036356-RA No alias (at4g22920 : 259.0) Similar to the tomato... 0.02 Orthogroups_2024-Update
Potri.003G119600 No alias non-yellowing 1 0.03 Orthogroups_2024-Update
Potri.005G184700 No alias Function unknown 0.06 Orthogroups_2024-Update
Pp1s212_1V6 No alias senescence-inducible chloroplast stay-green protein 1 0.06 Orthogroups_2024-Update
Pp1s68_185V6 No alias senescence-inducible chloroplast stay-green protein 1 0.03 Orthogroups_2024-Update
Seita.2G285600.1 No alias magnesium dechelatase *(SGR) 0.03 Orthogroups_2024-Update
Solyc04g063240 No alias STAY-GREEN-like protein (AHRD V3.3 *** AT1G44000.1) 0.07 Orthogroups_2024-Update
Sopen04g026160 No alias Staygreen protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0005986 sucrose biosynthetic process IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006817 phosphate ion transport IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0019203 carbohydrate phosphatase activity IEP Predicted GO
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Predicted GO
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Predicted GO
MF GO:0050307 sucrose-phosphate phosphatase activity IEP Predicted GO
MF GO:0050308 sugar-phosphatase activity IEP Predicted GO
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Predicted GO
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Predicted GO
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR024438 Staygreen 56 206
No external refs found!