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  5. Brara.A01627.1

Brara.A01627.1


Description : RING-H2-class BTL-subclass E3 ubiquitin ligase


Gene families : OG_42_0003270 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003270_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A01627.1
Cluster HCAA Clusters: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Bradi1g04180 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004057 arginyltransferase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
BP GO:0016598 protein arginylation IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 235 277
IPR039525 RNF126-like_zinc-ribbon 4 36
No external refs found!