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  5. Brara.A01995.1

Brara.A01995.1


Description : calcium-permeable channel *(OSCA)


Gene families : OG_42_0000192 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A01995.1
Cluster HCAA Clusters: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
A4A49_09861 No alias csc1-like protein rxw8 0.07 Orthogroups_2024-Update
At1g69450 No alias Early-responsive to dehydration stress protein (ERD4)... 0.03 Orthogroups_2024-Update
Brara.C02721.1 No alias calcium-permeable channel *(OSCA) 0.05 Orthogroups_2024-Update
Brara.H00805.1 No alias calcium-permeable channel *(OSCA) 0.1 Orthogroups_2024-Update
Brara.H02782.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
GRMZM2G164470 No alias lipases;hydrolases, acting on ester bonds 0.04 Orthogroups_2024-Update
Glyma.17G232235 No alias lipases;hydrolases, acting on ester bonds 0.04 Orthogroups_2024-Update
HORVU1Hr1G004230.1 No alias calcium-permeable channel *(OSCA) 0.04 Orthogroups_2024-Update
HORVU1Hr1G051200.12 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
HORVU2Hr1G060390.2 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
Kfl00319_0100 kfl00319_0100_v1.1 (at1g11960 : 547.0) ERD (early-responsive to dehydration... 0.04 Orthogroups_2024-Update
Kfl00551_0030 kfl00551_0030_v1.1 (at1g30360 : 436.0) early-responsive to dehydration 4... 0.04 Orthogroups_2024-Update
LOC_Os03g47070 No alias RXW8, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g39320 No alias DUF221 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g43720 No alias early-responsive to dehydration protein-related,... 0.03 Orthogroups_2024-Update
MA_158173g0010 No alias (at1g30360 : 759.0) early-responsive to dehydration 4... 0.03 Orthogroups_2024-Update
Pp1s127_53V6 No alias early-responsive to dehydration erd 0.03 Orthogroups_2024-Update
Seita.3G120200.1 No alias calcium-permeable channel *(OSCA) 0.03 Orthogroups_2024-Update
Seita.3G403000.1 No alias calcium-permeable channel *(OSCA) 0.04 Orthogroups_2024-Update
Sobic.008G187100.1 No alias calcium-permeable channel *(OSCA) 0.05 Orthogroups_2024-Update
Solyc06g084330 No alias ERD (early-responsive to dehydration stress) family... 0.02 Orthogroups_2024-Update
Solyc12g088230 No alias mitochondrial malate dehydrogenase 0.05 Orthogroups_2024-Update
Sopen02g025700 No alias Domain of unknown function DUF221 0.03 Orthogroups_2024-Update
Sopen12g030230 No alias Domain of unknown function DUF221 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006817 phosphate ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR027815 PHM7_cyt 201 363
IPR032880 Csc1_N 7 180
IPR003864 RSN1_7TM 374 646
No external refs found!