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Description : Unknown function
Gene families : OG_42_0000142 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000142_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa: Brara.A02079.1 | |
| Cluster | HCAA Clusters: Cluster_145 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi2g22284 | No alias | Bifunctional inhibitor/lipid-transfer protein/seed... | 0.02 | Orthogroups_2024-Update | |
| Brara.B01106.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.C01475.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Brara.D02349.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Brara.E00678.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| HORVU3Hr1G009370.5 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| LOC_Os11g02389 | No alias | protease inhibitor/seed storage/LTP family, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os12g02300 | No alias | LTPL26 - Protease inhibitor/seed storage/LTP family... | 0.03 | Orthogroups_2024-Update | |
| MA_209545g0010 | No alias | (q39950|nltp_helan : 104.0) Nonspecific lipid-transfer... | 0.03 | Orthogroups_2024-Update | |
| PSME_00005353-RA | No alias | (q43767|nlt41_horvu : 101.0) Nonspecific lipid-transfer... | 0.02 | Orthogroups_2024-Update | |
| PSME_00005354-RA | No alias | (q43767|nlt41_horvu : 97.4) Nonspecific lipid-transfer... | 0.02 | Orthogroups_2024-Update | |
| Seita.8G013500.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.008G030700.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.008G031000.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sopen10g027590 | No alias | Protease inhibitor/seed storage/LTP family | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000123 | histone acetyltransferase complex | IEP | Predicted GO |
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Predicted GO |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Predicted GO |
| MF | GO:0003724 | RNA helicase activity | IEP | Predicted GO |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Predicted GO |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Predicted GO |
| MF | GO:0004869 | cysteine-type endopeptidase inhibitor activity | IEP | Predicted GO |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Predicted GO |
| BP | GO:0006401 | RNA catabolic process | IEP | Predicted GO |
| BP | GO:0006402 | mRNA catabolic process | IEP | Predicted GO |
| BP | GO:0006473 | protein acetylation | IEP | Predicted GO |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | Predicted GO |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Predicted GO |
| BP | GO:0010564 | regulation of cell cycle process | IEP | Predicted GO |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Predicted GO |
| BP | GO:0016573 | histone acetylation | IEP | Predicted GO |
| CC | GO:0016592 | mediator complex | IEP | Predicted GO |
| MF | GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | IEP | Predicted GO |
| MF | GO:0016787 | hydrolase activity | IEP | Predicted GO |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Predicted GO |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | Predicted GO |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | Predicted GO |
| MF | GO:0019239 | deaminase activity | IEP | Predicted GO |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Predicted GO |
| CC | GO:0031248 | protein acetyltransferase complex | IEP | Predicted GO |
| BP | GO:0032465 | regulation of cytokinesis | IEP | Predicted GO |
| BP | GO:0032954 | regulation of cytokinetic process | IEP | Predicted GO |
| BP | GO:0032955 | regulation of division septum assembly | IEP | Predicted GO |
| BP | GO:0043543 | protein acylation | IEP | Predicted GO |
| BP | GO:0044087 | regulation of cellular component biogenesis | IEP | Predicted GO |
| CC | GO:0044428 | nuclear part | IEP | Predicted GO |
| CC | GO:0044451 | nucleoplasm part | IEP | Predicted GO |
| BP | GO:0051128 | regulation of cellular component organization | IEP | Predicted GO |
| BP | GO:0051301 | cell division | IEP | Predicted GO |
| BP | GO:0051302 | regulation of cell division | IEP | Predicted GO |
| BP | GO:1901891 | regulation of cell septum assembly | IEP | Predicted GO |
| CC | GO:1902493 | acetyltransferase complex | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR016140 | Bifunc_inhib/LTP/seed_store | 29 | 114 |
| No external refs found! |