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At1g75950


Description : SKP1-like protein 1A [Source:UniProtKB/Swiss-Prot;Acc:Q39255]


Gene families : OG_42_0000356 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At1g75950
Cluster HCCA clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
At2g03170 No alias SKP1-like protein 14 [Source:UniProtKB/Swiss-Prot;Acc:O81057] 0.03 Orthogroups_2024-Update
At3g60010 No alias SK13 [Source:UniProtKB/TrEMBL;Acc:A0A178VIM9] 0.05 Orthogroups_2024-Update
LOC_Os11g26910 No alias SKP1-like protein 1B, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00010537-RA No alias (at1g75950 : 182.0) SKP1 is core component of the SCF... 0.02 Orthogroups_2024-Update
PSME_00047744-RA No alias (at5g42190 : 155.0) Similar to SKP1 in yeast and humans... 0.03 Orthogroups_2024-Update
Seita.8G115900.1 No alias ASK-type linker component of SCF E3 ubiquitin ligase complexes 0.04 Orthogroups_2024-Update
Solyc01g111640 No alias SKP1-like protein (AHRD V3.3 *** C3V9V9_CITMA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005102 signaling receptor binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0008200 ion channel inhibitor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009617 response to bacterium IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
MF GO:0016247 channel regulator activity IEP Predicted GO
MF GO:0016248 channel inhibitor activity IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
BP GO:0042742 defense response to bacterium IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
MF GO:0098599 palmitoyl hydrolase activity IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
MF GO:0099106 ion channel regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR016072 Skp1_comp_dimer 111 158
IPR016073 Skp1_comp_POZ 4 63
No external refs found!