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  5. Brara.A02741.1

Brara.A02741.1


Description : transcriptional regulator of red/far-red light perception & FRS/FRF-type transcription factor


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Brassica rapa: Brara.A02741.1
Cluster HCAA Clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
At4g19990 No alias FAR1-related sequence 1 [Source:UniProtKB/TrEMBL;Acc:F4JU19] 0.02 Orthogroups_2024-Update
Brara.E01132.1 No alias FRS/FRF-type transcription factor 0.04 Orthogroups_2024-Update
Glyma.11G126700 No alias FRS (FAR1 Related Sequences) transcription factor family 0.02 Orthogroups_2024-Update
Glyma.20G079500 No alias far-red elongated hypocotyls 3 0.02 Orthogroups_2024-Update
HORVU3Hr1G097000.1 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os02g10840 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Potri.004G209000 No alias FAR1-related sequence 5 0.03 Orthogroups_2024-Update
Seita.1G186800.1 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.008G016300.1 No alias FRS/FRF-type transcription factor 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 274 366
IPR004330 FAR1_DNA_bnd_dom 72 178
No external refs found!