Description : Unknown function
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa: Brara.A02809.1 | |
Cluster | HCAA Clusters: Cluster_6 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
131643 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
84657 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
93321 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
97289 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.03 | Orthogroups_2024-Update | |
At1g06140 | No alias | Pentatricopeptide repeat-containing protein At1g06140,... | 0.04 | Orthogroups_2024-Update | |
Glyma.01G048100 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.15G273200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
MA_921g0010 | No alias | (at3g12770 : 484.0) Encodes a pentatricopeptide repeat... | 0.03 | Orthogroups_2024-Update | |
PSME_00045505-RA | No alias | (at2g22070 : 613.0) pentatricopeptide (PPR)... | 0.04 | Orthogroups_2024-Update | |
PSME_00051746-RA | No alias | (at3g03580 : 720.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
Potri.001G217600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.003G164900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.006G245300 | No alias | Function unknown | 0.02 | Orthogroups_2024-Update | |
Potri.007G050200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.015G018700 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.017G083900 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Seita.9G151300.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.002G200500.3 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.006G146400.4 | No alias | RNA editing factor *(MEF12) | 0.02 | Orthogroups_2024-Update | |
Sobic.008G041000.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.010G088200.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Solyc04g082870 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
Solyc09g092150 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
Sopen04g008620 | No alias | PPR repeat | 0.02 | Orthogroups_2024-Update | |
Sopen10g004410 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000151 | ubiquitin ligase complex | IEP | Predicted GO |
CC | GO:0000152 | nuclear ubiquitin ligase complex | IEP | Predicted GO |
MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Predicted GO |
MF | GO:0004817 | cysteine-tRNA ligase activity | IEP | Predicted GO |
MF | GO:0005524 | ATP binding | IEP | Predicted GO |
CC | GO:0005680 | anaphase-promoting complex | IEP | Predicted GO |
CC | GO:0005739 | mitochondrion | IEP | Predicted GO |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Predicted GO |
BP | GO:0006423 | cysteinyl-tRNA aminoacylation | IEP | Predicted GO |
MF | GO:0008144 | drug binding | IEP | Predicted GO |
MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
BP | GO:0008535 | respiratory chain complex IV assembly | IEP | Predicted GO |
BP | GO:0010498 | proteasomal protein catabolic process | IEP | Predicted GO |
BP | GO:0017004 | cytochrome complex assembly | IEP | Predicted GO |
MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
BP | GO:0030163 | protein catabolic process | IEP | Predicted GO |
BP | GO:0031145 | anaphase-promoting complex-dependent catabolic process | IEP | Predicted GO |
CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | Predicted GO |
MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
BP | GO:0033108 | mitochondrial respiratory chain complex assembly | IEP | Predicted GO |
BP | GO:0033617 | mitochondrial respiratory chain complex IV assembly | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
MF | GO:0036094 | small molecule binding | IEP | Predicted GO |
BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | Predicted GO |
MF | GO:0043167 | ion binding | IEP | Predicted GO |
MF | GO:0043168 | anion binding | IEP | Predicted GO |
MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Predicted GO |
MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Predicted GO |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
MF | GO:0097602 | cullin family protein binding | IEP | Predicted GO |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Predicted GO |
CC | GO:1990234 | transferase complex | IEP | Predicted GO |
No external refs found! |