Brara.A02870.1


Description : C2H2-type subclass ZAT transcription factor


Gene families : OG_42_0000046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa: Brara.A02870.1
Cluster HCAA Clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
A4A49_08900 No alias zinc finger protein zat5 0.02 Orthogroups_2024-Update
A4A49_10804 No alias zinc finger protein zat11 0.04 Orthogroups_2024-Update
A4A49_12201 No alias zinc finger protein zat5 0.04 Orthogroups_2024-Update
A4A49_15164 No alias zinc finger protein zat5 0.02 Orthogroups_2024-Update
A4A49_29565 No alias zinc finger protein zat5 0.04 Orthogroups_2024-Update
A4A49_41461 No alias zinc finger protein zat10 0.04 Orthogroups_2024-Update
At2g28200 No alias Zinc finger protein ZAT5 [Source:UniProtKB/Swiss-Prot;Acc:Q681X4] 0.06 Orthogroups_2024-Update
Brara.I00845.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G002805 No alias C2H2-type zinc finger family protein 0.02 Orthogroups_2024-Update
GRMZM2G140033 No alias C2H2-type zinc finger family protein 0.04 Orthogroups_2024-Update
GRMZM2G361210 No alias C2H2-type zinc finger family protein 0.02 Orthogroups_2024-Update
Glyma.04G044900 No alias salt tolerance zinc finger 0.03 Orthogroups_2024-Update
Glyma.12G081400 No alias C2H2-type zinc finger family protein 0.04 Orthogroups_2024-Update
Kfl00368_0180 kfl00368_0180_v1.1 no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
LOC_Os02g57790 No alias ZOS2-19 - C2H2 zinc finger protein, expressed 0.05 Orthogroups_2024-Update
PSME_00032797-RA No alias (at1g02040 : 96.7) C2H2-type zinc finger family protein;... 0.01 Orthogroups_2024-Update
Potri.001G295500 No alias salt tolerance zinc finger 0.03 Orthogroups_2024-Update
Potri.004G216900 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Solyc06g074800 No alias LOW QUALITY:Zinc finger family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen06g031240 No alias C2H2-type zinc finger 0.04 Orthogroups_2024-Update
Sopen11g026150 No alias C2H2-type zinc finger 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0019781 NEDD8 activating enzyme activity IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0045116 protein neddylation IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!